Introduction

The results of the analysis are presented using the following structure:

  1. Searchable High‑Level Summary: Provides a brief overview of the key findings from our analysis with a table of effects
  2. Visualisation, Descriptive Statistics and Diagnostics by Variable: Exploratory data analysis and model diagnostics for each behavioral measure
  3. Searchable ROPE Analysis Table: Model diagnostics to check the fit of the models

Effects of Interest

  • Females travelled further than males in the running wheel according to all variables.

Searchable High‑Level Summary

Enter search terms in the column headers to filter the table below

Note: TD in the Higher column indicates a Trend Difference for the continuous variable.

Visualisation, Descriptive Statistics and Diagnostics by Variable


Bar Plot

Density Plot

Metres per minute by Grouping Variables
Diet Sex n Mean SD Min Max % of Zeros Zero Flag
Control M 12.0 1.3 0.6 0.5 2.3 0.0
Control F 12.0 2.7 1.5 1.1 6.4 0.0
CR25 M 12.0 1.1 0.4 0.4 2.2 0.0
CR25 F 12.0 2.4 1.0 1.2 4.5 0.0
CRA M 10.0 1.1 0.6 0.3 2.4 0.0
CRA F 10.0 2.7 1.0 1.5 4.5 0.0
CRV M 12.0 1.1 0.7 0.2 2.9 0.0
CRV F 12.0 2.9 1.4 1.5 6.4 0.0
Warning symbols: * = >40% zeros in this group, ! = >20% zeros in entire sample Either flag triggers the use of a binary choice model.

Summary Table

Model Summary
Family: gamma
Parameter Estimate Std. Error 2.5% CI 97.5% CI Type
Fixed Effects
Intercept 0.273 0.128 0.033 0.533 Fixed Effects
DietCR25 −0.131 0.181 −0.491 0.218 Fixed Effects
DietCRA −0.127 0.189 −0.496 0.243 Fixed Effects
DietCRV −0.188 0.183 −0.549 0.170 Fixed Effects
SexF 0.722 0.177 0.376 1.069 Fixed Effects
DietCR25:SexF 0.001 0.252 −0.494 0.498 Fixed Effects
DietCRA:SexF 0.140 0.264 −0.377 0.660 Fixed Effects
DietCRV:SexF 0.260 0.255 −0.238 0.758 Fixed Effects

Posterior Check

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Convergence

Effect Median [95% HDI] Direction Prob. ROPE %
Diet: Control vs CR25
Diet: Control vs CR25 0.13 [-0.14, 0.37] 84.65 23.00
Diet: Control vs CRA
Diet: Control vs CRA 0.06 [-0.20, 0.33] 67.05 31.80
Diet: Control vs CRV
Diet: Control vs CRV 0.06 [-0.20, 0.33] 65.15 34.00
Diet: CR25 vs CRA
Diet: CR25 vs CRA -0.07 [-0.36, 0.18] 70.30 31.65
Diet: CR25 vs CRV
Diet: CR25 vs CRV -0.07 [-0.34, 0.19] 71.65 32.30
Diet: CRA vs CRV
Diet: CRA vs CRV 0.00 [-0.26, 0.31] 50.50 36.40
Sex: M vs F
Sex: M vs F -0.82 [-1.01, -0.65] 100.00 0.00

Effect Median [95% HDI] Direction Prob. ROPE %
Diet × Sex: Diet: Control vs CR25 × Sex: M vs F
Diet × Sex: Diet: Control vs CR25 × Sex: M vs F 0.01 [-0.49, 0.50] 50.95 21.45
Diet × Sex: Diet: Control vs CRA × Sex: M vs F
Diet × Sex: Diet: Control vs CRA × Sex: M vs F 0.14 [-0.38, 0.63] 70.10 16.75
Diet × Sex: Diet: Control vs CRV × Sex: M vs F
Diet × Sex: Diet: Control vs CRV × Sex: M vs F 0.26 [-0.27, 0.74] 85.15 11.35
Diet × Sex: Diet: CR25 vs CRA × Sex: M vs F
Diet × Sex: Diet: CR25 vs CRA × Sex: M vs F 0.14 [-0.40, 0.67] 68.60 15.70
Diet × Sex: Diet: CR25 vs CRV × Sex: M vs F
Diet × Sex: Diet: CR25 vs CRV × Sex: M vs F 0.25 [-0.21, 0.83] 83.35 12.85
Diet × Sex: Diet: CRA vs CRV × Sex: M vs F
Diet × Sex: Diet: CRA vs CRV × Sex: M vs F 0.12 [-0.45, 0.65] 67.45 15.75

Effect Median [95% HDI] Direction Prob. ROPE %
Diet × Sex: Control M vs CR25 F
Diet × Sex: Control M vs CR25 F -0.60 [-0.95, -0.23] 100.00 0.15
Diet × Sex: Control F vs CR25 M
Diet × Sex: Control F vs CR25 M 0.85 [0.49, 1.21] 100.00 0.00
Diet × Sex: Control M vs CRA F
Diet × Sex: Control M vs CRA F -0.73 [-1.12, -0.36] 100.00 0.00
Diet × Sex: Control F vs CRA M
Diet × Sex: Control F vs CRA M 0.85 [0.43, 1.20] 100.00 0.05
Diet × Sex: Control M vs CRV F
Diet × Sex: Control M vs CRV F -0.80 [-1.16, -0.44] 100.00 0.00
Diet × Sex: Control F vs CRV M
Diet × Sex: Control F vs CRV M 0.91 [0.54, 1.29] 100.00 0.00
Diet × Sex: CR25 M vs CRA F
Diet × Sex: CR25 M vs CRA F -0.87 [-1.21, -0.49] 99.95 0.05
Diet × Sex: CR25 F vs CRA M
Diet × Sex: CR25 F vs CRA M 0.72 [0.31, 1.08] 100.00 0.00
Diet × Sex: CR25 M vs CRV F
Diet × Sex: CR25 M vs CRV F -0.92 [-1.29, -0.55] 100.00 0.00
Diet × Sex: CR25 F vs CRV M
Diet × Sex: CR25 F vs CRV M 0.78 [0.42, 1.16] 99.95 0.05
Diet × Sex: CRA M vs CRV F
Diet × Sex: CRA M vs CRV F -0.92 [-1.29, -0.53] 100.00 0.00
Diet × Sex: CRA F vs CRV M
Diet × Sex: CRA F vs CRV M 0.92 [0.54, 1.30] 100.00 0.00

Effect Median [95% HDI] Direction Prob. ROPE %
Diet: Control vs CR25 (Sex=M)
Diet: Control vs CR25 (Sex=M) 0.13 [-0.22, 0.49] 78.00 23.10
Diet: Control vs CR25 (Sex=F)
Diet: Control vs CR25 (Sex=F) 0.13 [-0.25, 0.49] 75.35 22.40
Diet: Control vs CRA (Sex=M)
Diet: Control vs CRA (Sex=M) 0.13 [-0.24, 0.46] 75.60 21.55
Diet: Control vs CRA (Sex=F)
Diet: Control vs CRA (Sex=F) -0.02 [-0.42, 0.35] 53.30 25.30
Diet: Control vs CRV (Sex=M)
Diet: Control vs CRV (Sex=M) 0.19 [-0.19, 0.53] 85.90 15.95
Diet: Control vs CRV (Sex=F)
Diet: Control vs CRV (Sex=F) -0.07 [-0.45, 0.29] 64.90 25.10
Diet: CR25 vs CRA (Sex=M)
Diet: CR25 vs CRA (Sex=M) -0.01 [-0.37, 0.39] 53.25 26.05
Diet: CR25 vs CRA (Sex=F)
Diet: CR25 vs CRA (Sex=F) -0.15 [-0.55, 0.24] 77.30 20.85
Diet: CR25 vs CRV (Sex=M)
Diet: CR25 vs CRV (Sex=M) 0.06 [-0.32, 0.41] 60.90 24.00
Diet: CR25 vs CRV (Sex=F)
Diet: CR25 vs CRV (Sex=F) -0.19 [-0.60, 0.13] 85.60 14.20
Diet: CRA vs CRV (Sex=M)
Diet: CRA vs CRV (Sex=M) 0.06 [-0.31, 0.46] 62.95 25.70
Diet: CRA vs CRV (Sex=F)
Diet: CRA vs CRV (Sex=F) -0.05 [-0.44, 0.33] 59.80 23.60
Sex: M vs F (Diet=Control)
Sex: M vs F (Diet=Control) -0.72 [-1.06, -0.35] 100.00 0.00
Sex: M vs F (Diet=CR25)
Sex: M vs F (Diet=CR25) -0.73 [-1.10, -0.38] 99.95 0.10
Sex: M vs F (Diet=CRA)
Sex: M vs F (Diet=CRA) -0.87 [-1.27, -0.46] 99.95 0.05
Sex: M vs F (Diet=CRV)
Sex: M vs F (Diet=CRV) -0.98 [-1.36, -0.64] 100.00 0.00

No continuous ROPE effects available.

Bar Plot

Density Plot

Interval Count by Grouping Variables
Diet Sex n Mean SD Min Max % of Zeros Zero Flag
Control M 12.0 1.2 0.5 0.4 2.1 0.0
Control F 12.0 2.5 1.3 1.0 5.8 0.0
CR25 M 12.0 1.0 0.4 0.4 2.0 0.0
CR25 F 12.0 2.1 0.9 1.1 4.1 0.0
CRA M 10.0 1.0 0.6 0.3 2.2 0.0
CRA F 10.0 2.5 0.9 1.4 4.1 0.0
CRV M 12.0 1.0 0.6 0.2 2.6 0.0
CRV F 12.0 2.6 1.3 1.4 5.8 0.0
Warning symbols: * = >40% zeros in this group, ! = >20% zeros in entire sample Either flag triggers the use of a binary choice model.

Summary Table

Model Summary
Family: gamma
Parameter Estimate Std. Error 2.5% CI 97.5% CI Type
Fixed Effects
Intercept 0.178 0.126 −0.064 0.433 Fixed Effects
DietCR25 −0.130 0.178 −0.480 0.224 Fixed Effects
DietCRA −0.132 0.193 −0.505 0.252 Fixed Effects
DietCRV −0.188 0.181 −0.542 0.170 Fixed Effects
SexF 0.722 0.174 0.383 1.069 Fixed Effects
DietCR25:SexF 0.000 0.248 −0.495 0.482 Fixed Effects
DietCRA:SexF 0.143 0.263 −0.374 0.655 Fixed Effects
DietCRV:SexF 0.261 0.248 −0.235 0.749 Fixed Effects

Posterior Check

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Convergence

Effect Median [95% HDI] Direction Prob. ROPE %
Diet: Control vs CR25
Diet: Control vs CR25 0.13 [-0.14, 0.40] 83.55 22.15
Diet: Control vs CRA
Diet: Control vs CRA 0.06 [-0.22, 0.34] 65.85 31.95
Diet: Control vs CRV
Diet: Control vs CRV 0.05 [-0.21, 0.32] 66.35 34.50
Diet: CR25 vs CRA
Diet: CR25 vs CRA -0.07 [-0.36, 0.23] 69.95 31.70
Diet: CR25 vs CRV
Diet: CR25 vs CRV -0.07 [-0.34, 0.20] 70.55 31.90
Diet: CRA vs CRV
Diet: CRA vs CRV 0.00 [-0.27, 0.29] 50.45 34.15
Sex: M vs F
Sex: M vs F -0.82 [-1.01, -0.63] 100.00 0.00

Effect Median [95% HDI] Direction Prob. ROPE %
Diet × Sex: Diet: Control vs CR25 × Sex: M vs F
Diet × Sex: Diet: Control vs CR25 × Sex: M vs F 0.00 [-0.50, 0.48] 50.20 22.80
Diet × Sex: Diet: Control vs CRA × Sex: M vs F
Diet × Sex: Diet: Control vs CRA × Sex: M vs F 0.15 [-0.38, 0.65] 70.60 16.10
Diet × Sex: Diet: Control vs CRV × Sex: M vs F
Diet × Sex: Diet: Control vs CRV × Sex: M vs F 0.25 [-0.20, 0.77] 85.40 11.65
Diet × Sex: Diet: CR25 vs CRA × Sex: M vs F
Diet × Sex: Diet: CR25 vs CRA × Sex: M vs F 0.13 [-0.40, 0.65] 70.10 16.00
Diet × Sex: Diet: CR25 vs CRV × Sex: M vs F
Diet × Sex: Diet: CR25 vs CRV × Sex: M vs F 0.25 [-0.23, 0.77] 84.35 11.80
Diet × Sex: Diet: CRA vs CRV × Sex: M vs F
Diet × Sex: Diet: CRA vs CRV × Sex: M vs F 0.11 [-0.39, 0.64] 67.05 16.45

Effect Median [95% HDI] Direction Prob. ROPE %
Diet × Sex: Control M vs CR25 F
Diet × Sex: Control M vs CR25 F -0.60 [-0.95, -0.23] 99.9 0.20
Diet × Sex: Control F vs CR25 M
Diet × Sex: Control F vs CR25 M 0.85 [0.51, 1.23] 100.0 0.00
Diet × Sex: Control M vs CRA F
Diet × Sex: Control M vs CRA F -0.74 [-1.12, -0.34] 100.0 0.10
Diet × Sex: Control F vs CRA M
Diet × Sex: Control F vs CRA M 0.85 [0.46, 1.22] 100.0 0.00
Diet × Sex: Control M vs CRV F
Diet × Sex: Control M vs CRV F -0.80 [-1.16, -0.45] 100.0 0.00
Diet × Sex: Control F vs CRV M
Diet × Sex: Control F vs CRV M 0.91 [0.54, 1.27] 100.0 0.00
Diet × Sex: CR25 M vs CRA F
Diet × Sex: CR25 M vs CRA F -0.87 [-1.28, -0.50] 100.0 0.00
Diet × Sex: CR25 F vs CRA M
Diet × Sex: CR25 F vs CRA M 0.72 [0.35, 1.14] 100.0 0.05
Diet × Sex: CR25 M vs CRV F
Diet × Sex: CR25 M vs CRV F -0.92 [-1.30, -0.56] 100.0 0.00
Diet × Sex: CR25 F vs CRV M
Diet × Sex: CR25 F vs CRV M 0.78 [0.43, 1.17] 100.0 0.00
Diet × Sex: CRA M vs CRV F
Diet × Sex: CRA M vs CRV F -0.93 [-1.31, -0.54] 100.0 0.00
Diet × Sex: CRA F vs CRV M
Diet × Sex: CRA F vs CRV M 0.92 [0.53, 1.31] 100.0 0.00

Effect Median [95% HDI] Direction Prob. ROPE %
Diet: Control vs CR25 (Sex=M)
Diet: Control vs CR25 (Sex=M) 0.13 [-0.20, 0.51] 77.25 20.55
Diet: Control vs CR25 (Sex=F)
Diet: Control vs CR25 (Sex=F) 0.14 [-0.23, 0.46] 76.90 21.40
Diet: Control vs CRA (Sex=M)
Diet: Control vs CRA (Sex=M) 0.13 [-0.25, 0.52] 76.40 20.15
Diet: Control vs CRA (Sex=F)
Diet: Control vs CRA (Sex=F) -0.01 [-0.36, 0.37] 51.15 27.85
Diet: Control vs CRV (Sex=M)
Diet: Control vs CRV (Sex=M) 0.19 [-0.15, 0.56] 86.55 16.40
Diet: Control vs CRV (Sex=F)
Diet: Control vs CRV (Sex=F) -0.07 [-0.44, 0.27] 65.20 25.90
Diet: CR25 vs CRA (Sex=M)
Diet: CR25 vs CRA (Sex=M) 0.00 [-0.35, 0.41] 50.30 24.80
Diet: CR25 vs CRA (Sex=F)
Diet: CR25 vs CRA (Sex=F) -0.14 [-0.50, 0.25] 76.30 18.80
Diet: CR25 vs CRV (Sex=M)
Diet: CR25 vs CRV (Sex=M) 0.06 [-0.31, 0.43] 62.60 25.30
Diet: CR25 vs CRV (Sex=F)
Diet: CR25 vs CRV (Sex=F) -0.21 [-0.56, 0.16] 86.45 13.50
Diet: CRA vs CRV (Sex=M)
Diet: CRA vs CRV (Sex=M) 0.05 [-0.32, 0.44] 60.55 24.50
Diet: CRA vs CRV (Sex=F)
Diet: CRA vs CRV (Sex=F) -0.07 [-0.46, 0.33] 62.40 22.55
Sex: M vs F (Diet=Control)
Sex: M vs F (Diet=Control) -0.72 [-1.05, -0.38] 100.00 0.00
Sex: M vs F (Diet=CR25)
Sex: M vs F (Diet=CR25) -0.72 [-1.06, -0.37] 100.00 0.05
Sex: M vs F (Diet=CRA)
Sex: M vs F (Diet=CRA) -0.86 [-1.23, -0.44] 100.00 0.00
Sex: M vs F (Diet=CRV)
Sex: M vs F (Diet=CRV) -0.99 [-1.37, -0.63] 100.00 0.00

No continuous ROPE effects available.

Bar Plot

Density Plot

Distance Travelled by Grouping Variables
Diet Sex n Mean SD Min Max % of Zeros Zero Flag
Control M 12.0 156.7 68.0 55.2 272.2 0.0
Control F 12.0 323.9 175.0 134.8 771.5 0.0
CR25 M 12.0 136.9 52.2 47.8 262.3 0.0
CR25 F 12.0 282.6 123.2 140.3 536.5 0.0
CRA M 10.0 136.5 73.1 40.5 290.5 0.0
CRA F 10.0 326.2 125.3 182.4 542.3 0.0
CRV M 12.0 128.4 82.2 28.6 343.2 0.0
CRV F 12.0 347.9 166.5 179.8 768.4 0.0
Warning symbols: * = >40% zeros in this group, ! = >20% zeros in entire sample Either flag triggers the use of a binary choice model.

Summary Table

Model Summary
Family: gamma
Parameter Estimate Std. Error 2.5% CI 97.5% CI Type
Fixed Effects
Intercept 5.059 0.127 4.818 5.311 Fixed Effects
DietCR25 −0.128 0.179 −0.477 0.226 Fixed Effects
DietCRA −0.131 0.189 −0.498 0.245 Fixed Effects
DietCRV −0.189 0.178 −0.538 0.151 Fixed Effects
SexF 0.723 0.173 0.384 1.066 Fixed Effects
DietCR25:SexF −0.004 0.248 −0.492 0.485 Fixed Effects
DietCRA:SexF 0.141 0.259 −0.373 0.640 Fixed Effects
DietCRV:SexF 0.261 0.247 −0.222 0.745 Fixed Effects

Posterior Check

$data # A tibble: 1,012 × 7 y_id y_name rep_id rep_label is_y is_y_label value 1 1 1 1 italic(y)[rep] ( 1 ) FALSE italic(y)[rep] 104. 2 1 1 2 italic(y)[rep] ( 2 ) FALSE italic(y)[rep] 324. 3 1 1 3 italic(y)[rep] ( 3 ) FALSE italic(y)[rep] 182. 4 1 1 4 italic(y)[rep] ( 4 ) FALSE italic(y)[rep] 86.5 5 1 1 5 italic(y)[rep] ( 5 ) FALSE italic(y)[rep] 141. 6 1 1 6 italic(y)[rep] ( 6 ) FALSE italic(y)[rep] 100. 7 1 1 7 italic(y)[rep] ( 7 ) FALSE italic(y)[rep] 241. 8 1 1 8 italic(y)[rep] ( 8 ) FALSE italic(y)[rep] 161. 9 1 1 9 italic(y)[rep] ( 9 ) FALSE italic(y)[rep] 137. 10 1 1 10 italic(y)[rep] ( 10 ) FALSE italic(y)[rep] 164. # ℹ 1,002 more rows

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Convergence

Effect Median [95% HDI] Direction Prob. ROPE %
Diet: Control vs CR25
Diet: Control vs CR25 0.12 [-0.14, 0.37] 82.70 24.35
Diet: Control vs CRA
Diet: Control vs CRA 0.06 [-0.20, 0.35] 65.75 32.75
Diet: Control vs CRV
Diet: Control vs CRV 0.05 [-0.18, 0.33] 65.75 34.30
Diet: CR25 vs CRA
Diet: CR25 vs CRA -0.06 [-0.33, 0.22] 67.50 33.40
Diet: CR25 vs CRV
Diet: CR25 vs CRV -0.07 [-0.34, 0.20] 71.40 32.00
Diet: CRA vs CRV
Diet: CRA vs CRV -0.01 [-0.27, 0.26] 53.80 35.50
Sex: M vs F
Sex: M vs F -0.82 [-1.01, -0.63] 100.00 0.00

Effect Median [95% HDI] Direction Prob. ROPE %
Diet × Sex: Diet: Control vs CR25 × Sex: M vs F
Diet × Sex: Diet: Control vs CR25 × Sex: M vs F -0.01 [-0.49, 0.48] 50.90 20.10
Diet × Sex: Diet: Control vs CRA × Sex: M vs F
Diet × Sex: Diet: Control vs CRA × Sex: M vs F 0.15 [-0.39, 0.61] 72.50 17.00
Diet × Sex: Diet: Control vs CRV × Sex: M vs F
Diet × Sex: Diet: Control vs CRV × Sex: M vs F 0.27 [-0.20, 0.74] 86.00 10.85
Diet × Sex: Diet: CR25 vs CRA × Sex: M vs F
Diet × Sex: Diet: CR25 vs CRA × Sex: M vs F 0.14 [-0.35, 0.70] 71.15 16.30
Diet × Sex: Diet: CR25 vs CRV × Sex: M vs F
Diet × Sex: Diet: CR25 vs CRV × Sex: M vs F 0.27 [-0.24, 0.78] 84.60 12.10
Diet × Sex: Diet: CRA vs CRV × Sex: M vs F
Diet × Sex: Diet: CRA vs CRV × Sex: M vs F 0.12 [-0.37, 0.63] 67.00 17.65

Effect Median [95% HDI] Direction Prob. ROPE %
Diet × Sex: Control M vs CR25 F
Diet × Sex: Control M vs CR25 F -0.59 [-0.94, -0.23] 99.9 0.35
Diet × Sex: Control F vs CR25 M
Diet × Sex: Control F vs CR25 M 0.84 [0.50, 1.23] 100.0 0.00
Diet × Sex: Control M vs CRA F
Diet × Sex: Control M vs CRA F -0.73 [-1.13, -0.36] 100.0 0.00
Diet × Sex: Control F vs CRA M
Diet × Sex: Control F vs CRA M 0.86 [0.49, 1.25] 100.0 0.00
Diet × Sex: Control M vs CRV F
Diet × Sex: Control M vs CRV F -0.80 [-1.16, -0.46] 100.0 0.00
Diet × Sex: Control F vs CRV M
Diet × Sex: Control F vs CRV M 0.91 [0.55, 1.28] 100.0 0.00
Diet × Sex: CR25 M vs CRA F
Diet × Sex: CR25 M vs CRA F -0.85 [-1.22, -0.46] 100.0 0.00
Diet × Sex: CR25 F vs CRA M
Diet × Sex: CR25 F vs CRA M 0.73 [0.36, 1.13] 100.0 0.05
Diet × Sex: CR25 M vs CRV F
Diet × Sex: CR25 M vs CRV F -0.92 [-1.31, -0.58] 100.0 0.00
Diet × Sex: CR25 F vs CRV M
Diet × Sex: CR25 F vs CRV M 0.79 [0.42, 1.16] 100.0 0.00
Diet × Sex: CRA M vs CRV F
Diet × Sex: CRA M vs CRV F -0.94 [-1.31, -0.56] 100.0 0.00
Diet × Sex: CRA F vs CRV M
Diet × Sex: CRA F vs CRV M 0.92 [0.51, 1.28] 100.0 0.00

Effect Median [95% HDI] Direction Prob. ROPE %
Diet: Control vs CR25 (Sex=M)
Diet: Control vs CR25 (Sex=M) 0.13 [-0.22, 0.46] 78.25 21.75
Diet: Control vs CR25 (Sex=F)
Diet: Control vs CR25 (Sex=F) 0.13 [-0.26, 0.47] 76.55 20.70
Diet: Control vs CRA (Sex=M)
Diet: Control vs CRA (Sex=M) 0.14 [-0.21, 0.52] 77.00 18.95
Diet: Control vs CRA (Sex=F)
Diet: Control vs CRA (Sex=F) -0.01 [-0.37, 0.36] 52.70 26.40
Diet: Control vs CRV (Sex=M)
Diet: Control vs CRV (Sex=M) 0.19 [-0.17, 0.52] 87.10 17.00
Diet: Control vs CRV (Sex=F)
Diet: Control vs CRV (Sex=F) -0.07 [-0.43, 0.30] 65.00 26.05
Diet: CR25 vs CRA (Sex=M)
Diet: CR25 vs CRA (Sex=M) 0.01 [-0.37, 0.35] 51.45 23.75
Diet: CR25 vs CRA (Sex=F)
Diet: CR25 vs CRA (Sex=F) -0.15 [-0.49, 0.26] 75.60 19.60
Diet: CR25 vs CRV (Sex=M)
Diet: CR25 vs CRV (Sex=M) 0.06 [-0.32, 0.42] 62.20 26.60
Diet: CR25 vs CRV (Sex=F)
Diet: CR25 vs CRV (Sex=F) -0.20 [-0.55, 0.18] 86.30 15.55
Diet: CRA vs CRV (Sex=M)
Diet: CRA vs CRV (Sex=M) 0.05 [-0.35, 0.41] 61.05 26.95
Diet: CRA vs CRV (Sex=F)
Diet: CRA vs CRV (Sex=F) -0.06 [-0.40, 0.33] 62.95 25.45
Sex: M vs F (Diet=Control)
Sex: M vs F (Diet=Control) -0.72 [-1.04, -0.37] 100.00 0.00
Sex: M vs F (Diet=CR25)
Sex: M vs F (Diet=CR25) -0.73 [-1.09, -0.37] 100.00 0.00
Sex: M vs F (Diet=CRA)
Sex: M vs F (Diet=CRA) -0.87 [-1.23, -0.47] 100.00 0.00
Sex: M vs F (Diet=CRV)
Sex: M vs F (Diet=CRV) -0.98 [-1.34, -0.62] 100.00 0.00

No continuous ROPE effects available.

Bar Plot

Density Plot

Total Count by Grouping Variables
Diet Sex n Mean SD Min Max % of Zeros Zero Flag
Control M 12.0 142.5 61.8 50.2 247.5 0.0
Control F 12.0 294.5 159.1 122.5 701.3 0.0
CR25 M 12.0 124.4 47.5 43.4 238.4 0.0
CR25 F 12.0 256.9 112.0 127.6 487.8 0.0
CRA M 10.0 124.1 66.4 36.8 264.1 0.0
CRA F 10.0 296.6 113.9 165.8 493.0 0.0
CRV M 12.0 116.7 74.7 26.0 312.0 0.0
CRV F 12.0 316.3 151.3 163.5 698.6 0.0
Warning symbols: * = >40% zeros in this group, ! = >20% zeros in entire sample Either flag triggers the use of a binary choice model.

Summary Table

Model Summary
Family: gamma
Parameter Estimate Std. Error 2.5% CI 97.5% CI Type
Fixed Effects
Intercept 4.964 0.129 4.720 5.222 Fixed Effects
DietCR25 −0.132 0.182 −0.489 0.223 Fixed Effects
DietCRA −0.128 0.190 −0.501 0.244 Fixed Effects
DietCRV −0.188 0.182 −0.545 0.166 Fixed Effects
SexF 0.722 0.178 0.373 1.069 Fixed Effects
DietCR25:SexF 0.002 0.254 −0.499 0.495 Fixed Effects
DietCRA:SexF 0.141 0.262 −0.373 0.645 Fixed Effects
DietCRV:SexF 0.261 0.252 −0.239 0.755 Fixed Effects

Posterior Check

$data # A tibble: 1,012 × 7 y_id y_name rep_id rep_label is_y is_y_label value 1 1 1 1 italic(y)[rep] ( 1 ) FALSE italic(y)[rep] 156. 2 1 1 2 italic(y)[rep] ( 2 ) FALSE italic(y)[rep] 170. 3 1 1 3 italic(y)[rep] ( 3 ) FALSE italic(y)[rep] 205. 4 1 1 4 italic(y)[rep] ( 4 ) FALSE italic(y)[rep] 75.5 5 1 1 5 italic(y)[rep] ( 5 ) FALSE italic(y)[rep] 205. 6 1 1 6 italic(y)[rep] ( 6 ) FALSE italic(y)[rep] 89.0 7 1 1 7 italic(y)[rep] ( 7 ) FALSE italic(y)[rep] 115. 8 1 1 8 italic(y)[rep] ( 8 ) FALSE italic(y)[rep] 227. 9 1 1 9 italic(y)[rep] ( 9 ) FALSE italic(y)[rep] 197. 10 1 1 10 italic(y)[rep] ( 10 ) FALSE italic(y)[rep] 90.8 # ℹ 1,002 more rows

\(layers\)layers[[1]] mapping: group = ~.data$rep_id, colour = yrep geom_line: na.rm = FALSE, orientation = NA stat_density: bw = nrd0, adjust = 1, kernel = gaussian, n = 1024, trim = FALSE, na.rm = FALSE, bounds = c(-Inf, Inf), orientation = NA position_identity

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attr(,“class”) [1] “theme” “gg”
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\(labels\)labels$title [1] “Posterior Predictive Check”

\(labels\)x NULL

\(labels\)y NULL

\(labels\)group [1] “rep_id”

\(labels\)colour [1] “colour”

\(labels\)fill [1] “fill” attr(,“fallback”) [1] TRUE

\(labels\)weight [1] “weight” attr(,“fallback”) [1] TRUE

attr(,“class”) [1] “gg” “ggplot”

Convergence

Effect Median [95% HDI] Direction Prob. ROPE %
Diet: Control vs CR25
Diet: Control vs CR25 0.12 [-0.14, 0.39] 84.15 23.65
Diet: Control vs CRA
Diet: Control vs CRA 0.05 [-0.23, 0.32] 65.30 32.15
Diet: Control vs CRV
Diet: Control vs CRV 0.06 [-0.21, 0.31] 65.95 34.10
Diet: CR25 vs CRA
Diet: CR25 vs CRA -0.08 [-0.33, 0.22] 70.90 29.05
Diet: CR25 vs CRV
Diet: CR25 vs CRV -0.07 [-0.36, 0.17] 73.10 33.60
Diet: CRA vs CRV
Diet: CRA vs CRV 0.00 [-0.26, 0.29] 50.75 35.00
Sex: M vs F
Sex: M vs F -0.83 [-1.03, -0.66] 100.00 0.00

Effect Median [95% HDI] Direction Prob. ROPE %
Diet × Sex: Diet: Control vs CR25 × Sex: M vs F
Diet × Sex: Diet: Control vs CR25 × Sex: M vs F 0.00 [-0.52, 0.49] 50.15 20.95
Diet × Sex: Diet: Control vs CRA × Sex: M vs F
Diet × Sex: Diet: Control vs CRA × Sex: M vs F 0.14 [-0.39, 0.63] 70.20 15.65
Diet × Sex: Diet: Control vs CRV × Sex: M vs F
Diet × Sex: Diet: Control vs CRV × Sex: M vs F 0.27 [-0.19, 0.81] 83.90 12.25
Diet × Sex: Diet: CR25 vs CRA × Sex: M vs F
Diet × Sex: Diet: CR25 vs CRA × Sex: M vs F 0.14 [-0.38, 0.71] 68.85 16.35
Diet × Sex: Diet: CR25 vs CRV × Sex: M vs F
Diet × Sex: Diet: CR25 vs CRV × Sex: M vs F 0.26 [-0.21, 0.83] 83.65 12.40
Diet × Sex: Diet: CRA vs CRV × Sex: M vs F
Diet × Sex: Diet: CRA vs CRV × Sex: M vs F 0.12 [-0.39, 0.69] 66.55 17.10

Effect Median [95% HDI] Direction Prob. ROPE %
Diet × Sex: Control M vs CR25 F
Diet × Sex: Control M vs CR25 F -0.60 [-0.97, -0.25] 99.95 0.20
Diet × Sex: Control F vs CR25 M
Diet × Sex: Control F vs CR25 M 0.86 [0.51, 1.24] 100.00 0.00
Diet × Sex: Control M vs CRA F
Diet × Sex: Control M vs CRA F -0.75 [-1.11, -0.33] 100.00 0.00
Diet × Sex: Control F vs CRA M
Diet × Sex: Control F vs CRA M 0.85 [0.49, 1.25] 100.00 0.00
Diet × Sex: Control M vs CRV F
Diet × Sex: Control M vs CRV F -0.81 [-1.17, -0.44] 100.00 0.00
Diet × Sex: Control F vs CRV M
Diet × Sex: Control F vs CRV M 0.92 [0.51, 1.27] 100.00 0.00
Diet × Sex: CR25 M vs CRA F
Diet × Sex: CR25 M vs CRA F -0.88 [-1.25, -0.49] 100.00 0.00
Diet × Sex: CR25 F vs CRA M
Diet × Sex: CR25 F vs CRA M 0.71 [0.33, 1.08] 100.00 0.05
Diet × Sex: CR25 M vs CRV F
Diet × Sex: CR25 M vs CRV F -0.93 [-1.33, -0.58] 100.00 0.00
Diet × Sex: CR25 F vs CRV M
Diet × Sex: CR25 F vs CRV M 0.78 [0.39, 1.12] 100.00 0.00
Diet × Sex: CRA M vs CRV F
Diet × Sex: CRA M vs CRV F -0.93 [-1.29, -0.54] 100.00 0.00
Diet × Sex: CRA F vs CRV M
Diet × Sex: CRA F vs CRV M 0.93 [0.52, 1.29] 100.00 0.00

Effect Median [95% HDI] Direction Prob. ROPE %
Diet: Control vs CR25 (Sex=M)
Diet: Control vs CR25 (Sex=M) 0.12 [-0.23, 0.49] 75.50 23.05
Diet: Control vs CR25 (Sex=F)
Diet: Control vs CR25 (Sex=F) 0.14 [-0.22, 0.48] 77.80 20.45
Diet: Control vs CRA (Sex=M)
Diet: Control vs CRA (Sex=M) 0.13 [-0.23, 0.54] 74.75 21.20
Diet: Control vs CRA (Sex=F)
Diet: Control vs CRA (Sex=F) -0.02 [-0.39, 0.36] 53.10 26.40
Diet: Control vs CRV (Sex=M)
Diet: Control vs CRV (Sex=M) 0.19 [-0.17, 0.55] 84.10 16.85
Diet: Control vs CRV (Sex=F)
Diet: Control vs CRV (Sex=F) -0.07 [-0.47, 0.26] 65.55 24.50
Diet: CR25 vs CRA (Sex=M)
Diet: CR25 vs CRA (Sex=M) 0.01 [-0.39, 0.38] 51.50 25.85
Diet: CR25 vs CRA (Sex=F)
Diet: CR25 vs CRA (Sex=F) -0.15 [-0.51, 0.23] 77.45 18.90
Diet: CR25 vs CRV (Sex=M)
Diet: CR25 vs CRV (Sex=M) 0.06 [-0.30, 0.41] 62.25 25.70
Diet: CR25 vs CRV (Sex=F)
Diet: CR25 vs CRV (Sex=F) -0.20 [-0.58, 0.14] 86.60 14.95
Diet: CRA vs CRV (Sex=M)
Diet: CRA vs CRV (Sex=M) 0.06 [-0.33, 0.45] 61.80 24.60
Diet: CRA vs CRV (Sex=F)
Diet: CRA vs CRV (Sex=F) -0.06 [-0.49, 0.30] 61.55 24.00
Sex: M vs F (Diet=Control)
Sex: M vs F (Diet=Control) -0.72 [-1.04, -0.36] 100.00 0.00
Sex: M vs F (Diet=CR25)
Sex: M vs F (Diet=CR25) -0.72 [-1.10, -0.39] 100.00 0.00
Sex: M vs F (Diet=CRA)
Sex: M vs F (Diet=CRA) -0.86 [-1.23, -0.48] 100.00 0.00
Sex: M vs F (Diet=CRV)
Sex: M vs F (Diet=CRV) -0.98 [-1.33, -0.59] 100.00 0.00

No continuous ROPE effects available.

End of Document