Note: TD in the Higher column indicates a Trend Difference for the continuous variable.
Executive Summary
Maternal Preconception Study
Back Test
Introduction
The results of the analysis are presented using the following structure:
- Searchable High‑Level Summary: Provides a brief overview of the key findings from our analysis with a table of effects
- Visualisation, Descriptive Statistics and Diagnostics by Variable: Exploratory data analysis and model diagnostics for each behavioral measure
- Searchable ROPE Analysis Table: Model diagnostics to check the fit of the models
Effects of Interest
- There were less escape attempts and vocalisations in Session 2 compared to Session 1
- Males attempted more escapes than females
- Females vocalised more than males
- CRA males escaped more than Control males in Session 2
- CR25 females escaped more than Control females in Session 2
- CRV Females escaped more than Control females in Session 1
- CRA M vocalised less than Control males in both sessions
- CRV Females vocalised less than Control females in Session 2
Searchable High‑Level Summary
Enter search terms in the column headers to filter the table below
Visualisation, Descriptive Statistics and Diagnostics by Variable
Bar Plot
Density Plot
| Escape Attempts Excluding Biting by Grouping Variables | ||||||||
| Diet | Sex | n | Mean | SD | Min | Max | % of Zeros | Zero Flag |
|---|---|---|---|---|---|---|---|---|
| Control | M | 28.0 | 12.6 | 4.1 | 6.0 | 25.0 | 0.0 | |
| Control | F | 24.0 | 10.2 | 2.6 | 5.0 | 16.0 | 0.0 | |
| CR25 | M | 28.0 | 12.8 | 3.1 | 8.0 | 21.0 | 0.0 | |
| CR25 | F | 28.0 | 11.9 | 2.4 | 7.0 | 17.0 | 0.0 | |
| CRA | M | 28.0 | 13.2 | 2.1 | 9.0 | 17.0 | 0.0 | |
| CRA | F | 28.0 | 11.1 | 3.1 | 5.0 | 20.0 | 0.0 | |
| CRV | M | 28.0 | 13.2 | 2.5 | 9.0 | 17.5 | 0.0 | |
| CRV | F | 26.0 | 11.8 | 1.9 | 8.0 | 16.0 | 0.0 | |
| Warning symbols: * = >40% zeros in this group, ! = >20% zeros in entire sample Either flag triggers the use of a binary choice model. | ||||||||
Summary Table
| Model Summary | |||||
| Family: gamma | |||||
| Parameter | Estimate | Std. Error | 2.5% CI | 97.5% CI | Type |
|---|---|---|---|---|---|
| Fixed Effects | |||||
| Intercept | 2.904 | 0.116 | 2.678 | 3.135 | Fixed Effects |
| DietCR25 | −0.083 | 0.165 | −0.414 | 0.240 | Fixed Effects |
| DietCRA | −0.181 | 0.166 | −0.514 | 0.145 | Fixed Effects |
| DietCRV | −0.032 | 0.167 | −0.362 | 0.299 | Fixed Effects |
| SexF | −0.617 | 0.166 | −0.945 | −0.294 | Fixed Effects |
| Session | −0.258 | 0.073 | −0.404 | −0.115 | Fixed Effects |
| DietCR25:SexF | 0.171 | 0.233 | −0.288 | 0.636 | Fixed Effects |
| DietCRA:SexF | 0.162 | 0.233 | −0.293 | 0.622 | Fixed Effects |
| DietCRV:SexF | 0.201 | 0.236 | −0.259 | 0.668 | Fixed Effects |
| DietCR25:Session | 0.074 | 0.104 | −0.130 | 0.277 | Fixed Effects |
| DietCRA:Session | 0.167 | 0.104 | −0.038 | 0.374 | Fixed Effects |
| DietCRV:Session | 0.063 | 0.104 | −0.138 | 0.270 | Fixed Effects |
| SexF:Session | 0.282 | 0.104 | 0.080 | 0.487 | Fixed Effects |
| DietCR25:SexF:Session | −0.032 | 0.146 | −0.315 | 0.259 | Fixed Effects |
| DietCRA:SexF:Session | −0.102 | 0.146 | −0.392 | 0.182 | Fixed Effects |
| DietCRV:SexF:Session | −0.079 | 0.148 | −0.372 | 0.207 | Fixed Effects |
Posterior Check
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Convergence
| Effect | Median | [95% HDI] | Direction Prob. | ROPE % |
|---|---|---|---|---|
| Diet: Control vs CR25 | ||||
| Diet: Control vs CR25 | -0.09 | [-0.18, 0.01] | 97.20 | 8.30 |
| Diet: Control vs CRA | ||||
| Diet: Control vs CRA | -0.07 | [-0.16, 0.02] | 93.40 | 13.60 |
| Diet: Control vs CRV | ||||
| Diet: Control vs CRV | -0.10 | [-0.20, -0.01] | 98.35 | 4.65 |
| Diet: CR25 vs CRA | ||||
| Diet: CR25 vs CRA | 0.02 | [-0.07, 0.11] | 63.55 | 37.55 |
| Diet: CR25 vs CRV | ||||
| Diet: CR25 vs CRV | -0.02 | [-0.11, 0.08] | 61.75 | 36.25 |
| Diet: CRA vs CRV | ||||
| Diet: CRA vs CRV | -0.03 | [-0.13, 0.06] | 73.70 | 32.25 |
| Sex: M vs F | ||||
| Sex: M vs F | 0.14 | [0.07, 0.20] | 100.00 | 0.00 |
| Effect | Median | [95% HDI] | Direction Prob. | ROPE % |
|---|---|---|---|---|
| Diet × Sex: Diet: Control vs CR25 × Sex: M vs F | ||||
| Diet × Sex: Diet: Control vs CR25 × Sex: M vs F | 0.12 | [-0.07, 0.30] | 89.10 | 9.95 |
| Diet × Sex: Diet: Control vs CRA × Sex: M vs F | ||||
| Diet × Sex: Diet: Control vs CRA × Sex: M vs F | 0.01 | [-0.19, 0.19] | 52.50 | 20.75 |
| Diet × Sex: Diet: Control vs CRV × Sex: M vs F | ||||
| Diet × Sex: Diet: Control vs CRV × Sex: M vs F | 0.08 | [-0.11, 0.27] | 79.95 | 14.10 |
| Diet × Sex: Diet: CR25 vs CRA × Sex: M vs F | ||||
| Diet × Sex: Diet: CR25 vs CRA × Sex: M vs F | -0.11 | [-0.31, 0.08] | 87.75 | 11.10 |
| Diet × Sex: Diet: CR25 vs CRV × Sex: M vs F | ||||
| Diet × Sex: Diet: CR25 vs CRV × Sex: M vs F | -0.04 | [-0.22, 0.15] | 66.35 | 19.75 |
| Diet × Sex: Diet: CRA vs CRV × Sex: M vs F | ||||
| Diet × Sex: Diet: CRA vs CRV × Sex: M vs F | 0.08 | [-0.10, 0.27] | 77.90 | 15.55 |
| Effect | Median | [95% HDI] | Direction Prob. | ROPE % |
|---|---|---|---|---|
| Diet × Sex: Control M vs CR25 F | ||||
| Diet × Sex: Control M vs CR25 F | 0.04 | [-0.09, 0.17] | 73.00 | 23.55 |
| Diet × Sex: Control F vs CR25 M | ||||
| Diet × Sex: Control F vs CR25 M | -0.22 | [-0.36, -0.08] | 99.95 | 0.30 |
| Diet × Sex: Control M vs CRA F | ||||
| Diet × Sex: Control M vs CRA F | 0.11 | [-0.01, 0.24] | 95.90 | 7.80 |
| Diet × Sex: Control F vs CRA M | ||||
| Diet × Sex: Control F vs CRA M | -0.26 | [-0.40, -0.12] | 100.00 | 0.00 |
| Diet × Sex: Control M vs CRV F | ||||
| Diet × Sex: Control M vs CRV F | 0.05 | [-0.08, 0.17] | 76.05 | 23.70 |
| Diet × Sex: Control F vs CRV M | ||||
| Diet × Sex: Control F vs CRV M | -0.25 | [-0.39, -0.12] | 99.95 | 0.00 |
| Diet × Sex: CR25 M vs CRA F | ||||
| Diet × Sex: CR25 M vs CRA F | 0.14 | [0.01, 0.27] | 98.20 | 3.25 |
| Diet × Sex: CR25 F vs CRA M | ||||
| Diet × Sex: CR25 F vs CRA M | -0.11 | [-0.24, 0.01] | 95.70 | 7.35 |
| Diet × Sex: CR25 M vs CRV F | ||||
| Diet × Sex: CR25 M vs CRV F | 0.07 | [-0.07, 0.20] | 86.55 | 16.45 |
| Diet × Sex: CR25 F vs CRV M | ||||
| Diet × Sex: CR25 F vs CRV M | -0.10 | [-0.24, 0.02] | 93.70 | 8.65 |
| Diet × Sex: CRA M vs CRV F | ||||
| Diet × Sex: CRA M vs CRV F | 0.11 | [-0.03, 0.24] | 95.40 | 6.75 |
| Diet × Sex: CRA F vs CRV M | ||||
| Diet × Sex: CRA F vs CRV M | -0.18 | [-0.30, -0.04] | 99.60 | 0.80 |
| Effect | Median | [95% HDI] | Direction Prob. | ROPE % |
|---|---|---|---|---|
| Session: Overall Change | ||||
| Session: Overall Change 1 - 2 | -0.07 | [-0.12, -0.01] | 99.3 | 6.15 |
| Effect | Median | [95% HDI] | Direction Prob. | ROPE % |
|---|---|---|---|---|
| Session: Control, M | ||||
| Session: Control, M 1 | 2.64 | [2.54, 2.76] | 100.00 | 0.00 |
| Session: Control, M 2 | 2.39 | [2.27, 2.50] | 100.00 | 0.00 |
| Session: Control, M 1 - 2 | -0.26 | [-0.39, -0.11] | 100.00 | 0.05 |
| Session: CR25, M | ||||
| Session: CR25, M 1 | 2.64 | [2.52, 2.76] | 100.00 | 0.00 |
| Session: CR25, M 2 | 2.45 | [2.33, 2.58] | 100.00 | 0.00 |
| Session: CR25, M 1 - 2 | -0.19 | [-0.35, -0.04] | 99.15 | 1.80 |
| Session: CRA, M | ||||
| Session: CRA, M 1 | 2.63 | [2.50, 2.74] | 100.00 | 0.00 |
| Session: CRA, M 2 | 2.54 | [2.42, 2.66] | 100.00 | 0.00 |
| Session: CRA, M 1 - 2 | -0.09 | [-0.24, 0.06] | 88.25 | 12.65 |
| Session: CRV, M | ||||
| Session: CRV, M 1 | 2.67 | [2.55, 2.80] | 100.00 | 0.00 |
| Session: CRV, M 2 | 2.48 | [2.36, 2.60] | 100.00 | 0.00 |
| Session: CRV, M 1 - 2 | -0.19 | [-0.35, -0.05] | 98.95 | 1.15 |
| Session: Control, F | ||||
| Session: Control, F 1 | 2.31 | [2.19, 2.43] | 100.00 | 0.00 |
| Session: Control, F 2 | 2.33 | [2.21, 2.46] | 100.00 | 0.00 |
| Session: Control, F 1 - 2 | 0.02 | [-0.12, 0.19] | 61.55 | 24.30 |
| Session: CR25, F | ||||
| Session: CR25, F 1 | 2.44 | [2.32, 2.56] | 100.00 | 0.00 |
| Session: CR25, F 2 | 2.50 | [2.39, 2.64] | 100.00 | 0.00 |
| Session: CR25, F 1 - 2 | 0.07 | [-0.08, 0.22] | 78.95 | 17.65 |
| Session: CRA, F | ||||
| Session: CRA, F 1 | 2.36 | [2.24, 2.47] | 100.00 | 0.00 |
| Session: CRA, F 2 | 2.44 | [2.31, 2.56] | 100.00 | 0.00 |
| Session: CRA, F 1 - 2 | 0.09 | [-0.07, 0.23] | 88.05 | 13.35 |
| Session: CRV, F | ||||
| Session: CRV, F 1 | 2.47 | [2.35, 2.59] | 100.00 | 0.00 |
| Session: CRV, F 2 | 2.47 | [2.34, 2.59] | 100.00 | 0.00 |
| Session: CRV, F 1 - 2 | 0.01 | [-0.15, 0.16] | 54.55 | 22.75 |
| Effect | Median | [95% HDI] | Direction Prob. | ROPE % |
|---|---|---|---|---|
| Session × Diet: Control, M - CR25, M | ||||
| Session × Diet: Control, M - CR25, M 1 | 0.01 | [-0.15, 0.17] | 54.35 | 22.60 |
| Session × Diet: Control, M - CR25, M 2 | -0.06 | [-0.22, 0.11] | 76.15 | 16.25 |
| Session × Diet: Control, M - CRA, M | ||||
| Session × Diet: Control, M - CRA, M 1 | 0.02 | [-0.16, 0.17] | 57.15 | 23.05 |
| Session × Diet: Control, M - CRA, M 2 | -0.15 | [-0.31, 0.02] | 96.20 | 4.75 |
| Session × Diet: Control, M - CRV, M | ||||
| Session × Diet: Control, M - CRV, M 1 | -0.03 | [-0.20, 0.12] | 62.25 | 20.70 |
| Session × Diet: Control, M - CRV, M 2 | -0.09 | [-0.26, 0.08] | 87.40 | 12.20 |
| Session × Sex: Control, M - Control, F | ||||
| Session × Sex: Control, M - Control, F 1 | 0.34 | [0.17, 0.49] | 100.00 | 0.00 |
| Session × Sex: Control, M - Control, F 2 | 0.05 | [-0.13, 0.22] | 71.95 | 18.30 |
| Session × Diet × Sex: Control, M - CR25, F | ||||
| Session × Diet × Sex: Control, M - CR25, F 1 | 0.21 | [0.03, 0.36] | 99.40 | 1.05 |
| Session × Diet × Sex: Control, M - CR25, F 2 | -0.12 | [-0.28, 0.06] | 91.20 | 8.95 |
| Session × Diet × Sex: Control, M - CRA, F | ||||
| Session × Diet × Sex: Control, M - CRA, F 1 | 0.29 | [0.13, 0.46] | 99.95 | 0.00 |
| Session × Diet × Sex: Control, M - CRA, F 2 | -0.06 | [-0.21, 0.11] | 74.25 | 17.05 |
| Session × Diet × Sex: Control, M - CRV, F | ||||
| Session × Diet × Sex: Control, M - CRV, F 1 | 0.18 | [0.01, 0.34] | 98.65 | 2.25 |
| Session × Diet × Sex: Control, M - CRV, F 2 | -0.09 | [-0.25, 0.09] | 84.00 | 13.90 |
| Session × Diet: CR25, M - CRA, M | ||||
| Session × Diet: CR25, M - CRA, M 1 | 0.01 | [-0.18, 0.16] | 53.40 | 22.25 |
| Session × Diet: CR25, M - CRA, M 2 | -0.08 | [-0.25, 0.10] | 84.35 | 14.15 |
| Session × Diet: CR25, M - CRV, M | ||||
| Session × Diet: CR25, M - CRV, M 1 | -0.04 | [-0.20, 0.13] | 66.30 | 20.65 |
| Session × Diet: CR25, M - CRV, M 2 | -0.03 | [-0.20, 0.13] | 63.65 | 22.20 |
| Session × Diet × Sex: CR25, M - Control, F | ||||
| Session × Diet × Sex: CR25, M - Control, F 1 | 0.33 | [0.17, 0.50] | 100.00 | 0.00 |
| Session × Diet × Sex: CR25, M - Control, F 2 | 0.12 | [-0.06, 0.29] | 89.95 | 9.80 |
| Session × Sex: CR25, M - CR25, F | ||||
| Session × Sex: CR25, M - CR25, F 1 | 0.20 | [0.03, 0.36] | 99.00 | 1.25 |
| Session × Sex: CR25, M - CR25, F 2 | -0.05 | [-0.23, 0.11] | 74.95 | 17.05 |
| Session × Diet × Sex: CR25, M - CRA, F | ||||
| Session × Diet × Sex: CR25, M - CRA, F 1 | 0.28 | [0.12, 0.46] | 100.00 | 0.20 |
| Session × Diet × Sex: CR25, M - CRA, F 2 | 0.01 | [-0.17, 0.17] | 52.65 | 22.20 |
| Session × Diet × Sex: CR25, M - CRV, F | ||||
| Session × Diet × Sex: CR25, M - CRV, F 1 | 0.17 | [0.01, 0.36] | 97.70 | 3.30 |
| Session × Diet × Sex: CR25, M - CRV, F 2 | -0.02 | [-0.20, 0.14] | 59.25 | 21.80 |
| Session × Diet: CRA, M - CRV, M | ||||
| Session × Diet: CRA, M - CRV, M 1 | -0.04 | [-0.21, 0.12] | 69.40 | 21.70 |
| Session × Diet: CRA, M - CRV, M 2 | 0.06 | [-0.13, 0.22] | 74.65 | 16.80 |
| Session × Diet × Sex: CRA, M - Control, F | ||||
| Session × Diet × Sex: CRA, M - Control, F 1 | 0.32 | [0.15, 0.49] | 100.00 | 0.00 |
| Session × Diet × Sex: CRA, M - Control, F 2 | 0.20 | [0.04, 0.39] | 99.10 | 1.50 |
| Session × Diet × Sex: CRA, M - CR25, F | ||||
| Session × Diet × Sex: CRA, M - CR25, F 1 | 0.19 | [0.03, 0.37] | 98.75 | 1.75 |
| Session × Diet × Sex: CRA, M - CR25, F 2 | 0.03 | [-0.13, 0.21] | 63.75 | 20.60 |
| Session × Sex: CRA, M - CRA, F | ||||
| Session × Sex: CRA, M - CRA, F 1 | 0.28 | [0.11, 0.44] | 100.00 | 0.00 |
| Session × Sex: CRA, M - CRA, F 2 | 0.10 | [-0.08, 0.28] | 85.60 | 12.75 |
| Session × Diet × Sex: CRA, M - CRV, F | ||||
| Session × Diet × Sex: CRA, M - CRV, F 1 | 0.17 | [0.00, 0.34] | 97.50 | 4.20 |
| Session × Diet × Sex: CRA, M - CRV, F 2 | 0.06 | [-0.10, 0.23] | 75.90 | 17.85 |
| Session × Diet × Sex: CRV, M - Control, F | ||||
| Session × Diet × Sex: CRV, M - Control, F 1 | 0.36 | [0.20, 0.53] | 100.00 | 0.00 |
| Session × Diet × Sex: CRV, M - Control, F 2 | 0.15 | [-0.03, 0.33] | 94.70 | 5.90 |
| Session × Diet × Sex: CRV, M - CR25, F | ||||
| Session × Diet × Sex: CRV, M - CR25, F 1 | 0.24 | [0.06, 0.41] | 99.70 | 0.85 |
| Session × Diet × Sex: CRV, M - CR25, F 2 | -0.03 | [-0.19, 0.15] | 61.00 | 21.20 |
| Session × Diet × Sex: CRV, M - CRA, F | ||||
| Session × Diet × Sex: CRV, M - CRA, F 1 | 0.32 | [0.16, 0.49] | 100.00 | 0.00 |
| Session × Diet × Sex: CRV, M - CRA, F 2 | 0.04 | [-0.15, 0.19] | 65.10 | 19.30 |
| Session × Sex: CRV, M - CRV, F | ||||
| Session × Sex: CRV, M - CRV, F 1 | 0.21 | [0.04, 0.37] | 99.20 | 1.40 |
| Session × Sex: CRV, M - CRV, F 2 | 0.00 | [-0.16, 0.17] | 52.50 | 23.10 |
| Session × Diet: Control, F - CR25, F | ||||
| Session × Diet: Control, F - CR25, F 1 | -0.13 | [-0.30, 0.04] | 92.60 | 7.80 |
| Session × Diet: Control, F - CR25, F 2 | -0.17 | [-0.35, 0.02] | 96.50 | 3.45 |
| Session × Diet: Control, F - CRA, F | ||||
| Session × Diet: Control, F - CRA, F 1 | -0.05 | [-0.21, 0.13] | 69.90 | 20.80 |
| Session × Diet: Control, F - CRA, F 2 | -0.11 | [-0.28, 0.07] | 89.10 | 9.30 |
| Session × Diet: Control, F - CRV, F | ||||
| Session × Diet: Control, F - CRV, F 1 | -0.16 | [-0.32, 0.02] | 95.45 | 5.60 |
| Session × Diet: Control, F - CRV, F 2 | -0.14 | [-0.31, 0.06] | 92.25 | 6.80 |
| Session × Diet: CR25, F - CRA, F | ||||
| Session × Diet: CR25, F - CRA, F 1 | 0.08 | [-0.08, 0.25] | 83.20 | 14.35 |
| Session × Diet: CR25, F - CRA, F 2 | 0.06 | [-0.10, 0.23] | 74.95 | 18.10 |
| Session × Diet: CR25, F - CRV, F | ||||
| Session × Diet: CR25, F - CRV, F 1 | -0.03 | [-0.19, 0.15] | 61.45 | 20.10 |
| Session × Diet: CR25, F - CRV, F 2 | 0.03 | [-0.16, 0.20] | 63.55 | 20.25 |
| Session × Diet: CRA, F - CRV, F | ||||
| Session × Diet: CRA, F - CRV, F 1 | -0.11 | [-0.29, 0.06] | 89.90 | 9.65 |
| Session × Diet: CRA, F - CRV, F 2 | -0.03 | [-0.20, 0.14] | 63.50 | 20.50 |
| Effect | Median | [95% HDI] | Direction Prob. | ROPE % |
|---|---|---|---|---|
| Diet: Control vs CR25 | Session = 1 | averaged over Sex | ||||
| Diet: Control vs CR25 | Session = 1 | averaged over Sex 1 | -0.06 | [-0.18, 0.06] | 84.40 | 20.95 |
| Diet: Control vs CRA | Session = 1 | averaged over Sex | ||||
| Diet: Control vs CRA | Session = 1 | averaged over Sex 1 | -0.02 | [-0.13, 0.11] | 60.40 | 31.45 |
| Diet: Control vs CRV | Session = 1 | averaged over Sex | ||||
| Diet: Control vs CRV | Session = 1 | averaged over Sex 1 | -0.09 | [-0.21, 0.03] | 93.30 | 10.80 |
| Diet: CR25 vs CRA | Session = 1 | averaged over Sex | ||||
| Diet: CR25 vs CRA | Session = 1 | averaged over Sex 1 | 0.05 | [-0.07, 0.18] | 76.35 | 22.80 |
| Diet: CR25 vs CRV | Session = 1 | averaged over Sex | ||||
| Diet: CR25 vs CRV | Session = 1 | averaged over Sex 1 | -0.03 | [-0.16, 0.10] | 68.70 | 27.70 |
| Diet: CRA vs CRV | Session = 1 | averaged over Sex | ||||
| Diet: CRA vs CRV | Session = 1 | averaged over Sex 1 | -0.08 | [-0.20, 0.05] | 88.70 | 14.95 |
| Diet: Control vs CR25 | Session = 2 | averaged over Sex | ||||
| Diet: Control vs CR25 | Session = 2 | averaged over Sex 2 | -0.12 | [-0.23, 0.02] | 96.30 | 7.00 |
| Diet: Control vs CRA | Session = 2 | averaged over Sex | ||||
| Diet: Control vs CRA | Session = 2 | averaged over Sex 2 | -0.13 | [-0.25, -0.01] | 98.40 | 4.10 |
| Diet: Control vs CRV | Session = 2 | averaged over Sex | ||||
| Diet: Control vs CRV | Session = 2 | averaged over Sex 2 | -0.12 | [-0.24, 0.00] | 96.70 | 5.60 |
| Diet: CR25 vs CRA | Session = 2 | averaged over Sex | ||||
| Diet: CR25 vs CRA | Session = 2 | averaged over Sex 2 | -0.01 | [-0.14, 0.10] | 59.45 | 30.55 |
| Diet: CR25 vs CRV | Session = 2 | averaged over Sex | ||||
| Diet: CR25 vs CRV | Session = 2 | averaged over Sex 2 | 0.00 | [-0.13, 0.12] | 50.50 | 30.70 |
| Diet: CRA vs CRV | Session = 2 | averaged over Sex | ||||
| Diet: CRA vs CRV | Session = 2 | averaged over Sex 2 | 0.01 | [-0.11, 0.13] | 59.60 | 29.95 |
| Sex: M vs F | Session = 1 | averaged over Diet | ||||
| Sex: M vs F | Session = 1 | averaged over Diet 1 | 0.25 | [0.17, 0.34] | 100.00 | 0.00 |
| Sex: M vs F | Session = 2 | averaged over Diet | ||||
| Sex: M vs F | Session = 2 | averaged over Diet 2 | 0.02 | [-0.06, 0.11] | 69.35 | 36.00 |
Bar Plot
Density Plot
| Escape Attempts Including Biting by Grouping Variables | ||||||||
| Diet | Sex | n | Mean | SD | Min | Max | % of Zeros | Zero Flag |
|---|---|---|---|---|---|---|---|---|
| Control | M | 28.0 | 12.9 | 4.3 | 6.0 | 27.0 | 0.0 | |
| Control | F | 24.0 | 10.4 | 2.6 | 5.0 | 16.0 | 0.0 | |
| CR25 | M | 28.0 | 13.0 | 3.2 | 8.0 | 21.5 | 0.0 | |
| CR25 | F | 28.0 | 12.0 | 2.4 | 7.0 | 17.5 | 0.0 | |
| CRA | M | 28.0 | 13.2 | 2.1 | 9.0 | 17.0 | 0.0 | |
| CRA | F | 28.0 | 11.1 | 3.1 | 5.0 | 20.0 | 0.0 | |
| CRV | M | 28.0 | 13.3 | 2.5 | 9.0 | 17.5 | 0.0 | |
| CRV | F | 26.0 | 11.9 | 1.9 | 8.0 | 16.0 | 0.0 | |
| Warning symbols: * = >40% zeros in this group, ! = >20% zeros in entire sample Either flag triggers the use of a binary choice model. | ||||||||
Summary Table
| Model Summary | |||||
| Family: gamma | |||||
| Parameter | Estimate | Std. Error | 2.5% CI | 97.5% CI | Type |
|---|---|---|---|---|---|
| Fixed Effects | |||||
| Intercept | 2.929 | 0.118 | 2.701 | 3.165 | Fixed Effects |
| DietCR25 | −0.080 | 0.168 | −0.407 | 0.250 | Fixed Effects |
| DietCRA | −0.204 | 0.168 | −0.536 | 0.125 | Fixed Effects |
| DietCRV | −0.038 | 0.171 | −0.370 | 0.291 | Fixed Effects |
| SexF | −0.611 | 0.167 | −0.938 | −0.285 | Fixed Effects |
| Session | −0.262 | 0.074 | −0.407 | −0.118 | Fixed Effects |
| DietCR25:SexF | 0.165 | 0.239 | −0.298 | 0.632 | Fixed Effects |
| DietCRA:SexF | 0.160 | 0.235 | −0.296 | 0.626 | Fixed Effects |
| DietCRV:SexF | 0.196 | 0.239 | −0.267 | 0.666 | Fixed Effects |
| DietCR25:Session | 0.067 | 0.105 | −0.138 | 0.271 | Fixed Effects |
| DietCRA:Session | 0.169 | 0.105 | −0.037 | 0.377 | Fixed Effects |
| DietCRV:Session | 0.061 | 0.106 | −0.143 | 0.271 | Fixed Effects |
| SexF:Session | 0.274 | 0.105 | 0.068 | 0.477 | Fixed Effects |
| DietCR25:SexF:Session | −0.025 | 0.150 | −0.319 | 0.267 | Fixed Effects |
| DietCRA:SexF:Session | −0.095 | 0.147 | −0.386 | 0.192 | Fixed Effects |
| DietCRV:SexF:Session | −0.073 | 0.150 | −0.370 | 0.220 | Fixed Effects |
Posterior Check
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Convergence
| Effect | Median | [95% HDI] | Direction Prob. | ROPE % |
|---|---|---|---|---|
| Diet: Control vs CR25 | ||||
| Diet: Control vs CR25 | -0.08 | [-0.18, 0.01] | 95.90 | 10.00 |
| Diet: Control vs CRA | ||||
| Diet: Control vs CRA | -0.06 | [-0.15, 0.04] | 90.05 | 19.05 |
| Diet: Control vs CRV | ||||
| Diet: Control vs CRV | -0.10 | [-0.19, -0.00] | 98.35 | 5.70 |
| Diet: CR25 vs CRA | ||||
| Diet: CR25 vs CRA | 0.03 | [-0.06, 0.12] | 69.85 | 33.95 |
| Diet: CR25 vs CRV | ||||
| Diet: CR25 vs CRV | -0.01 | [-0.10, 0.09] | 59.55 | 38.00 |
| Diet: CRA vs CRV | ||||
| Diet: CRA vs CRV | -0.04 | [-0.13, 0.06] | 78.05 | 29.75 |
| Sex: M vs F | ||||
| Sex: M vs F | 0.14 | [0.08, 0.21] | 100.00 | 0.10 |
| Effect | Median | [95% HDI] | Direction Prob. | ROPE % |
|---|---|---|---|---|
| Diet × Sex: Diet: Control vs CR25 × Sex: M vs F | ||||
| Diet × Sex: Diet: Control vs CR25 × Sex: M vs F | 0.13 | [-0.07, 0.30] | 90.85 | 8.85 |
| Diet × Sex: Diet: Control vs CRA × Sex: M vs F | ||||
| Diet × Sex: Diet: Control vs CRA × Sex: M vs F | 0.02 | [-0.16, 0.21] | 56.65 | 19.25 |
| Diet × Sex: Diet: Control vs CRV × Sex: M vs F | ||||
| Diet × Sex: Diet: Control vs CRV × Sex: M vs F | 0.09 | [-0.11, 0.27] | 81.15 | 14.00 |
| Diet × Sex: Diet: CR25 vs CRA × Sex: M vs F | ||||
| Diet × Sex: Diet: CR25 vs CRA × Sex: M vs F | -0.11 | [-0.29, 0.07] | 88.30 | 10.10 |
| Diet × Sex: Diet: CR25 vs CRV × Sex: M vs F | ||||
| Diet × Sex: Diet: CR25 vs CRV × Sex: M vs F | -0.04 | [-0.21, 0.15] | 66.00 | 18.95 |
| Diet × Sex: Diet: CRA vs CRV × Sex: M vs F | ||||
| Diet × Sex: Diet: CRA vs CRV × Sex: M vs F | 0.07 | [-0.10, 0.26] | 76.65 | 15.60 |
| Effect | Median | [95% HDI] | Direction Prob. | ROPE % |
|---|---|---|---|---|
| Diet × Sex: Control M vs CR25 F | ||||
| Diet × Sex: Control M vs CR25 F | 0.05 | [-0.09, 0.18] | 77.50 | 21.95 |
| Diet × Sex: Control F vs CR25 M | ||||
| Diet × Sex: Control F vs CR25 M | -0.22 | [-0.35, -0.08] | 100.00 | 0.20 |
| Diet × Sex: Control M vs CRA F | ||||
| Diet × Sex: Control M vs CRA F | 0.13 | [-0.00, 0.26] | 97.60 | 5.25 |
| Diet × Sex: Control F vs CRA M | ||||
| Diet × Sex: Control F vs CRA M | -0.25 | [-0.38, -0.11] | 100.00 | 0.00 |
| Diet × Sex: Control M vs CRV F | ||||
| Diet × Sex: Control M vs CRV F | 0.06 | [-0.08, 0.18] | 81.30 | 19.75 |
| Diet × Sex: Control F vs CRV M | ||||
| Diet × Sex: Control F vs CRV M | -0.25 | [-0.38, -0.11] | 99.95 | 0.00 |
| Diet × Sex: CR25 M vs CRA F | ||||
| Diet × Sex: CR25 M vs CRA F | 0.15 | [0.03, 0.28] | 99.10 | 1.95 |
| Diet × Sex: CR25 F vs CRA M | ||||
| Diet × Sex: CR25 F vs CRA M | -0.11 | [-0.23, 0.03] | 93.95 | 10.35 |
| Diet × Sex: CR25 M vs CRV F | ||||
| Diet × Sex: CR25 M vs CRV F | 0.08 | [-0.05, 0.21] | 88.90 | 14.40 |
| Diet × Sex: CR25 F vs CRV M | ||||
| Diet × Sex: CR25 F vs CRV M | -0.11 | [-0.24, 0.02] | 94.25 | 9.30 |
| Diet × Sex: CRA M vs CRV F | ||||
| Diet × Sex: CRA M vs CRV F | 0.11 | [-0.02, 0.23] | 95.35 | 7.75 |
| Diet × Sex: CRA F vs CRV M | ||||
| Diet × Sex: CRA F vs CRV M | -0.19 | [-0.32, -0.06] | 99.70 | 0.75 |
| Effect | Median | [95% HDI] | Direction Prob. | ROPE % |
|---|---|---|---|---|
| Session: Overall Change | ||||
| Session: Overall Change 1 - 2 | -0.08 | [-0.13, -0.02] | 99.55 | 3.8 |
| Effect | Median | [95% HDI] | Direction Prob. | ROPE % |
|---|---|---|---|---|
| Session: Control, M | ||||
| Session: Control, M 1 | 2.67 | [2.56, 2.78] | 100.00 | 0.00 |
| Session: Control, M 2 | 2.41 | [2.28, 2.52] | 100.00 | 0.00 |
| Session: Control, M 1 - 2 | -0.26 | [-0.40, -0.12] | 100.00 | 0.00 |
| Session: CR25, M | ||||
| Session: CR25, M 1 | 2.65 | [2.53, 2.77] | 100.00 | 0.00 |
| Session: CR25, M 2 | 2.46 | [2.34, 2.58] | 100.00 | 0.00 |
| Session: CR25, M 1 - 2 | -0.20 | [-0.35, -0.05] | 99.55 | 1.15 |
| Session: CRA, M | ||||
| Session: CRA, M 1 | 2.63 | [2.52, 2.75] | 100.00 | 0.00 |
| Session: CRA, M 2 | 2.54 | [2.41, 2.66] | 100.00 | 0.00 |
| Session: CRA, M 1 - 2 | -0.09 | [-0.25, 0.05] | 88.10 | 12.90 |
| Session: CRV, M | ||||
| Session: CRV, M 1 | 2.69 | [2.56, 2.80] | 100.00 | 0.00 |
| Session: CRV, M 2 | 2.49 | [2.38, 2.60] | 100.00 | 0.00 |
| Session: CRV, M 1 - 2 | -0.20 | [-0.35, -0.04] | 99.35 | 1.05 |
| Session: Control, F | ||||
| Session: Control, F 1 | 2.33 | [2.21, 2.45] | 100.00 | 0.00 |
| Session: Control, F 2 | 2.34 | [2.22, 2.47] | 100.00 | 0.00 |
| Session: Control, F 1 - 2 | 0.01 | [-0.15, 0.16] | 55.10 | 23.70 |
| Session: CR25, F | ||||
| Session: CR25, F 1 | 2.46 | [2.33, 2.57] | 100.00 | 0.00 |
| Session: CR25, F 2 | 2.51 | [2.39, 2.63] | 100.00 | 0.00 |
| Session: CR25, F 1 - 2 | 0.05 | [-0.11, 0.19] | 73.40 | 19.60 |
| Session: CRA, F | ||||
| Session: CRA, F 1 | 2.36 | [2.24, 2.47] | 100.00 | 0.00 |
| Session: CRA, F 2 | 2.44 | [2.32, 2.56] | 100.00 | 0.00 |
| Session: CRA, F 1 - 2 | 0.09 | [-0.07, 0.24] | 86.60 | 13.75 |
| Session: CRV, F | ||||
| Session: CRV, F 1 | 2.48 | [2.35, 2.59] | 100.00 | 0.00 |
| Session: CRV, F 2 | 2.47 | [2.35, 2.60] | 100.00 | 0.00 |
| Session: CRV, F 1 - 2 | 0.00 | [-0.17, 0.15] | 50.55 | 24.60 |
| Effect | Median | [95% HDI] | Direction Prob. | ROPE % |
|---|---|---|---|---|
| Session × Diet: Control, M - CR25, M | ||||
| Session × Diet: Control, M - CR25, M 1 | 0.01 | [-0.16, 0.16] | 56.05 | 22.85 |
| Session × Diet: Control, M - CR25, M 2 | -0.05 | [-0.24, 0.10] | 73.80 | 18.40 |
| Session × Diet: Control, M - CRA, M | ||||
| Session × Diet: Control, M - CRA, M 1 | 0.04 | [-0.12, 0.20] | 66.70 | 20.35 |
| Session × Diet: Control, M - CRA, M 2 | -0.13 | [-0.32, 0.03] | 93.95 | 7.25 |
| Session × Diet: Control, M - CRV, M | ||||
| Session × Diet: Control, M - CRV, M 1 | -0.02 | [-0.20, 0.13] | 60.30 | 22.95 |
| Session × Diet: Control, M - CRV, M 2 | -0.08 | [-0.24, 0.08] | 83.80 | 13.70 |
| Session × Sex: Control, M - Control, F | ||||
| Session × Sex: Control, M - Control, F 1 | 0.34 | [0.17, 0.50] | 99.95 | 0.10 |
| Session × Sex: Control, M - Control, F 2 | 0.06 | [-0.11, 0.24] | 76.90 | 17.35 |
| Session × Diet × Sex: Control, M - CR25, F | ||||
| Session × Diet × Sex: Control, M - CR25, F 1 | 0.21 | [0.05, 0.39] | 99.40 | 1.30 |
| Session × Diet × Sex: Control, M - CR25, F 2 | -0.10 | [-0.28, 0.06] | 89.15 | 11.30 |
| Session × Diet × Sex: Control, M - CRA, F | ||||
| Session × Diet × Sex: Control, M - CRA, F 1 | 0.31 | [0.15, 0.47] | 99.95 | 0.05 |
| Session × Diet × Sex: Control, M - CRA, F 2 | -0.04 | [-0.21, 0.14] | 65.55 | 21.85 |
| Session × Diet × Sex: Control, M - CRV, F | ||||
| Session × Diet × Sex: Control, M - CRV, F 1 | 0.19 | [0.02, 0.36] | 98.45 | 2.20 |
| Session × Diet × Sex: Control, M - CRV, F 2 | -0.07 | [-0.24, 0.10] | 79.10 | 16.10 |
| Session × Diet: CR25, M - CRA, M | ||||
| Session × Diet: CR25, M - CRA, M 1 | 0.02 | [-0.14, 0.20] | 59.35 | 21.25 |
| Session × Diet: CR25, M - CRA, M 2 | -0.08 | [-0.24, 0.10] | 81.20 | 16.65 |
| Session × Diet: CR25, M - CRV, M | ||||
| Session × Diet: CR25, M - CRV, M 1 | -0.03 | [-0.22, 0.13] | 66.75 | 20.25 |
| Session × Diet: CR25, M - CRV, M 2 | -0.03 | [-0.19, 0.14] | 62.00 | 21.90 |
| Session × Diet × Sex: CR25, M - Control, F | ||||
| Session × Diet × Sex: CR25, M - Control, F 1 | 0.32 | [0.14, 0.49] | 99.95 | 0.05 |
| Session × Diet × Sex: CR25, M - Control, F 2 | 0.12 | [-0.05, 0.30] | 91.20 | 9.85 |
| Session × Sex: CR25, M - CR25, F | ||||
| Session × Sex: CR25, M - CR25, F 1 | 0.20 | [0.02, 0.35] | 98.75 | 1.55 |
| Session × Sex: CR25, M - CR25, F 2 | -0.05 | [-0.22, 0.11] | 72.05 | 20.10 |
| Session × Diet × Sex: CR25, M - CRA, F | ||||
| Session × Diet × Sex: CR25, M - CRA, F 1 | 0.30 | [0.13, 0.46] | 100.00 | 0.05 |
| Session × Diet × Sex: CR25, M - CRA, F 2 | 0.02 | [-0.17, 0.17] | 57.85 | 20.90 |
| Session × Diet × Sex: CR25, M - CRV, F | ||||
| Session × Diet × Sex: CR25, M - CRV, F 1 | 0.18 | [0.01, 0.34] | 98.05 | 3.10 |
| Session × Diet × Sex: CR25, M - CRV, F 2 | -0.02 | [-0.18, 0.17] | 57.35 | 21.05 |
| Session × Diet: CRA, M - CRV, M | ||||
| Session × Diet: CRA, M - CRV, M 1 | -0.06 | [-0.23, 0.11] | 74.70 | 17.90 |
| Session × Diet: CRA, M - CRV, M 2 | 0.05 | [-0.11, 0.21] | 72.20 | 18.35 |
| Session × Diet × Sex: CRA, M - Control, F | ||||
| Session × Diet × Sex: CRA, M - Control, F 1 | 0.30 | [0.14, 0.48] | 99.95 | 0.15 |
| Session × Diet × Sex: CRA, M - Control, F 2 | 0.20 | [0.03, 0.39] | 98.30 | 2.05 |
| Session × Diet × Sex: CRA, M - CR25, F | ||||
| Session × Diet × Sex: CRA, M - CR25, F 1 | 0.18 | [-0.01, 0.33] | 97.25 | 2.75 |
| Session × Diet × Sex: CRA, M - CR25, F 2 | 0.03 | [-0.14, 0.19] | 62.90 | 21.00 |
| Session × Sex: CRA, M - CRA, F | ||||
| Session × Sex: CRA, M - CRA, F 1 | 0.27 | [0.10, 0.42] | 100.00 | 0.05 |
| Session × Sex: CRA, M - CRA, F 2 | 0.10 | [-0.06, 0.28] | 86.35 | 11.35 |
| Session × Diet × Sex: CRA, M - CRV, F | ||||
| Session × Diet × Sex: CRA, M - CRV, F 1 | 0.16 | [-0.02, 0.32] | 96.25 | 4.15 |
| Session × Diet × Sex: CRA, M - CRV, F 2 | 0.06 | [-0.11, 0.24] | 76.80 | 15.80 |
| Session × Diet × Sex: CRV, M - Control, F | ||||
| Session × Diet × Sex: CRV, M - Control, F 1 | 0.36 | [0.19, 0.53] | 100.00 | 0.05 |
| Session × Diet × Sex: CRV, M - Control, F 2 | 0.15 | [-0.03, 0.31] | 95.65 | 5.05 |
| Session × Diet × Sex: CRV, M - CR25, F | ||||
| Session × Diet × Sex: CRV, M - CR25, F 1 | 0.23 | [0.08, 0.41] | 99.50 | 0.65 |
| Session × Diet × Sex: CRV, M - CR25, F 2 | -0.02 | [-0.19, 0.16] | 59.80 | 21.90 |
| Session × Diet × Sex: CRV, M - CRA, F | ||||
| Session × Diet × Sex: CRV, M - CRA, F 1 | 0.33 | [0.17, 0.50] | 100.00 | 0.00 |
| Session × Diet × Sex: CRV, M - CRA, F 2 | 0.05 | [-0.12, 0.22] | 70.30 | 18.70 |
| Session × Sex: CRV, M - CRV, F | ||||
| Session × Sex: CRV, M - CRV, F 1 | 0.21 | [0.03, 0.38] | 99.05 | 1.30 |
| Session × Sex: CRV, M - CRV, F 2 | 0.01 | [-0.15, 0.19] | 56.45 | 22.10 |
| Session × Diet: Control, F - CR25, F | ||||
| Session × Diet: Control, F - CR25, F 1 | -0.13 | [-0.29, 0.05] | 92.80 | 7.15 |
| Session × Diet: Control, F - CR25, F 2 | -0.17 | [-0.32, 0.01] | 96.85 | 3.65 |
| Session × Diet: Control, F - CRA, F | ||||
| Session × Diet: Control, F - CRA, F 1 | -0.03 | [-0.18, 0.15] | 62.60 | 21.80 |
| Session × Diet: Control, F - CRA, F 2 | -0.10 | [-0.28, 0.07] | 88.05 | 11.30 |
| Session × Diet: Control, F - CRV, F | ||||
| Session × Diet: Control, F - CRV, F 1 | -0.14 | [-0.31, 0.03] | 94.50 | 6.10 |
| Session × Diet: Control, F - CRV, F 2 | -0.14 | [-0.30, 0.05] | 92.80 | 7.95 |
| Session × Diet: CR25, F - CRA, F | ||||
| Session × Diet: CR25, F - CRA, F 1 | 0.10 | [-0.07, 0.27] | 88.00 | 11.50 |
| Session × Diet: CR25, F - CRA, F 2 | 0.06 | [-0.10, 0.24] | 77.25 | 17.05 |
| Session × Diet: CR25, F - CRV, F | ||||
| Session × Diet: CR25, F - CRV, F 1 | -0.02 | [-0.17, 0.17] | 58.90 | 21.90 |
| Session × Diet: CR25, F - CRV, F 2 | 0.03 | [-0.14, 0.22] | 64.85 | 21.90 |
| Session × Diet: CRA, F - CRV, F | ||||
| Session × Diet: CRA, F - CRV, F 1 | -0.12 | [-0.28, 0.06] | 91.15 | 9.35 |
| Session × Diet: CRA, F - CRV, F 2 | -0.03 | [-0.21, 0.13] | 62.00 | 19.05 |
| Effect | Median | [95% HDI] | Direction Prob. | ROPE % |
|---|---|---|---|---|
| Diet: Control vs CR25 | Session = 1 | averaged over Sex | ||||
| Diet: Control vs CR25 | Session = 1 | averaged over Sex 1 | -0.06 | [-0.18, 0.06] | 82.10 | 22.60 |
| Diet: Control vs CRA | Session = 1 | averaged over Sex | ||||
| Diet: Control vs CRA | Session = 1 | averaged over Sex 1 | 0.01 | [-0.11, 0.13] | 53.20 | 31.95 |
| Diet: Control vs CRV | Session = 1 | averaged over Sex | ||||
| Diet: Control vs CRV | Session = 1 | averaged over Sex 1 | -0.08 | [-0.21, 0.03] | 91.10 | 12.95 |
| Diet: CR25 vs CRA | Session = 1 | averaged over Sex | ||||
| Diet: CR25 vs CRA | Session = 1 | averaged over Sex 1 | 0.06 | [-0.06, 0.18] | 83.70 | 19.45 |
| Diet: CR25 vs CRV | Session = 1 | averaged over Sex | ||||
| Diet: CR25 vs CRV | Session = 1 | averaged over Sex 1 | -0.03 | [-0.15, 0.09] | 67.20 | 29.65 |
| Diet: CRA vs CRV | Session = 1 | averaged over Sex | ||||
| Diet: CRA vs CRV | Session = 1 | averaged over Sex 1 | -0.09 | [-0.21, 0.03] | 93.05 | 11.70 |
| Diet: Control vs CR25 | Session = 2 | averaged over Sex | ||||
| Diet: Control vs CR25 | Session = 2 | averaged over Sex 2 | -0.11 | [-0.24, 0.01] | 95.50 | 7.55 |
| Diet: Control vs CRA | Session = 2 | averaged over Sex | ||||
| Diet: Control vs CRA | Session = 2 | averaged over Sex 2 | -0.12 | [-0.24, 0.01] | 96.80 | 4.80 |
| Diet: Control vs CRV | Session = 2 | averaged over Sex | ||||
| Diet: Control vs CRV | Session = 2 | averaged over Sex 2 | -0.11 | [-0.23, 0.02] | 95.85 | 7.50 |
| Diet: CR25 vs CRA | Session = 2 | averaged over Sex | ||||
| Diet: CR25 vs CRA | Session = 2 | averaged over Sex 2 | -0.01 | [-0.13, 0.11] | 55.20 | 30.80 |
| Diet: CR25 vs CRV | Session = 2 | averaged over Sex | ||||
| Diet: CR25 vs CRV | Session = 2 | averaged over Sex 2 | 0.00 | [-0.12, 0.13] | 51.80 | 29.75 |
| Diet: CRA vs CRV | Session = 2 | averaged over Sex | ||||
| Diet: CRA vs CRV | Session = 2 | averaged over Sex 2 | 0.01 | [-0.11, 0.14] | 56.50 | 30.80 |
| Sex: M vs F | Session = 1 | averaged over Diet | ||||
| Sex: M vs F | Session = 1 | averaged over Diet 1 | 0.26 | [0.16, 0.34] | 100.00 | 0.00 |
| Sex: M vs F | Session = 2 | averaged over Diet | ||||
| Sex: M vs F | Session = 2 | averaged over Diet 2 | 0.03 | [-0.05, 0.12] | 76.35 | 34.35 |
Bar Plot
Density Plot
| Vocalisations by Grouping Variables | ||||||||
| Diet | Sex | n | Mean | SD | Min | Max | % of Zeros | Zero Flag |
|---|---|---|---|---|---|---|---|---|
| Control | M | 28.0 | 3.2 | 3.8 | 0.0 | 12.0 | 32.1 | ! |
| Control | F | 24.0 | 21.0 | 17.2 | 1.0 | 55.0 | 0.0 | ! |
| CR25 | M | 28.0 | 4.4 | 6.2 | 0.0 | 24.0 | 39.3 | ! |
| CR25 | F | 28.0 | 16.2 | 15.8 | 0.0 | 70.0 | 7.1 | ! |
| CRA | M | 28.0 | 2.5 | 5.4 | 0.0 | 24.0 | 60.7 | * |
| CRA | F | 28.0 | 13.0 | 15.6 | 0.0 | 55.0 | 32.1 | ! |
| CRV | M | 28.0 | 2.2 | 3.6 | 0.0 | 16.0 | 53.6 | * |
| CRV | F | 26.0 | 9.6 | 12.2 | 0.0 | 48.0 | 26.9 | ! |
| Warning symbols: * = >40% zeros in this group, ! = >20% zeros in entire sample Either flag triggers the use of a binary choice model. | ||||||||
Summary Table
| Model Summary | |||||
| Family: zero_inflated_negbinomial | |||||
| Parameter | Estimate | Std. Error | 2.5% CI | 97.5% CI | Type |
|---|---|---|---|---|---|
| Fixed Effects | |||||
| Intercept | 2.097 | 0.479 | 1.165 | 3.040 | Fixed Effects |
| DietCR25 | 0.005 | 0.594 | −1.160 | 1.166 | Fixed Effects |
| DietCRA | −0.402 | 0.616 | −1.615 | 0.789 | Fixed Effects |
| DietCRV | −0.640 | 0.625 | −1.864 | 0.586 | Fixed Effects |
| SexF | 1.351 | 0.523 | 0.326 | 2.380 | Fixed Effects |
| Session | −0.812 | 0.294 | −1.388 | −0.231 | Fixed Effects |
| DietCR25:SexF | 0.092 | 0.685 | −1.264 | 1.437 | Fixed Effects |
| DietCRA:SexF | −0.644 | 0.703 | −2.015 | 0.750 | Fixed Effects |
| DietCRV:SexF | 0.273 | 0.701 | −1.107 | 1.637 | Fixed Effects |
| DietCR25:Session | 0.035 | 0.392 | −0.729 | 0.803 | Fixed Effects |
| DietCRA:Session | −0.486 | 0.422 | −1.321 | 0.343 | Fixed Effects |
| DietCRV:Session | 0.164 | 0.414 | −0.655 | 0.972 | Fixed Effects |
| SexF:Session | 0.292 | 0.343 | −0.378 | 0.970 | Fixed Effects |
| DietCR25:SexF:Session | −0.206 | 0.461 | −1.109 | 0.705 | Fixed Effects |
| DietCRA:SexF:Session | 0.705 | 0.490 | −0.259 | 1.665 | Fixed Effects |
| DietCRV:SexF:Session | −0.603 | 0.484 | −1.548 | 0.343 | Fixed Effects |
Posterior Check
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Convergence
| Effect | Median | [95% HDI] | Direction Prob. | ROPE % |
|---|---|---|---|---|
| Diet: Control vs CR25 | ||||
| Diet: Control vs CR25 | 0.03 | [-0.76, 0.76] | 54.00 | 25.90 |
| Diet: Control vs CRA | ||||
| Diet: Control vs CRA | 0.91 | [0.09, 1.75] | 98.85 | 2.60 |
| Diet: Control vs CRV | ||||
| Diet: Control vs CRV | 0.71 | [-0.10, 1.48] | 96.40 | 5.65 |
| Diet: CR25 vs CRA | ||||
| Diet: CR25 vs CRA | 0.87 | [0.04, 1.76] | 98.05 | 2.65 |
| Diet: CR25 vs CRV | ||||
| Diet: CR25 vs CRV | 0.66 | [-0.11, 1.48] | 94.65 | 6.65 |
| Diet: CRA vs CRV | ||||
| Diet: CRA vs CRV | -0.23 | [-1.10, 0.66] | 69.80 | 19.15 |
| Sex: M vs F | ||||
| Sex: M vs F | -1.69 | [-2.24, -1.11] | 100.00 | 0.00 |
| Effect | Median | [95% HDI] | Direction Prob. | ROPE % |
|---|---|---|---|---|
| Diet × Sex: Diet: Control vs CR25 × Sex: M vs F | ||||
| Diet × Sex: Diet: Control vs CR25 × Sex: M vs F | -0.20 | [-1.47, 1.13] | 62.05 | 12.60 |
| Diet × Sex: Diet: Control vs CRA × Sex: M vs F | ||||
| Diet × Sex: Diet: Control vs CRA × Sex: M vs F | 0.41 | [-0.87, 1.83] | 72.45 | 12.20 |
| Diet × Sex: Diet: Control vs CRV × Sex: M vs F | ||||
| Diet × Sex: Diet: Control vs CRV × Sex: M vs F | -0.59 | [-1.95, 0.86] | 81.90 | 9.05 |
| Diet × Sex: Diet: CR25 vs CRA × Sex: M vs F | ||||
| Diet × Sex: Diet: CR25 vs CRA × Sex: M vs F | 0.61 | [-0.81, 2.20] | 78.70 | 9.15 |
| Diet × Sex: Diet: CR25 vs CRV × Sex: M vs F | ||||
| Diet × Sex: Diet: CR25 vs CRV × Sex: M vs F | -0.39 | [-1.83, 1.10] | 70.70 | 11.50 |
| Diet × Sex: Diet: CRA vs CRV × Sex: M vs F | ||||
| Diet × Sex: Diet: CRA vs CRV × Sex: M vs F | -1.00 | [-2.57, 0.46] | 90.75 | 5.25 |
| Effect | Median | [95% HDI] | Direction Prob. | ROPE % |
|---|---|---|---|---|
| Diet × Sex: Control M vs CR25 F | ||||
| Diet × Sex: Control M vs CR25 F | -1.65 | [-2.58, -0.55] | 100.00 | 0.05 |
| Diet × Sex: Control F vs CR25 M | ||||
| Diet × Sex: Control F vs CR25 M | 1.71 | [0.60, 2.85] | 100.00 | 0.10 |
| Diet × Sex: Control M vs CRA F | ||||
| Diet × Sex: Control M vs CRA F | -1.08 | [-2.11, 0.07] | 96.90 | 3.10 |
| Diet × Sex: Control F vs CRA M | ||||
| Diet × Sex: Control F vs CRA M | 2.89 | [1.77, 4.12] | 100.00 | 0.00 |
| Diet × Sex: Control M vs CRV F | ||||
| Diet × Sex: Control M vs CRV F | -0.78 | [-1.92, 0.24] | 91.75 | 5.80 |
| Diet × Sex: Control F vs CRV M | ||||
| Diet × Sex: Control F vs CRV M | 2.19 | [1.07, 3.27] | 100.00 | 0.00 |
| Diet × Sex: CR25 M vs CRA F | ||||
| Diet × Sex: CR25 M vs CRA F | -1.01 | [-2.11, 0.08] | 95.55 | 3.65 |
| Diet × Sex: CR25 F vs CRA M | ||||
| Diet × Sex: CR25 F vs CRA M | 2.78 | [1.63, 3.92] | 100.00 | 0.00 |
| Diet × Sex: CR25 M vs CRV F | ||||
| Diet × Sex: CR25 M vs CRV F | -0.71 | [-1.81, 0.39] | 89.45 | 7.65 |
| Diet × Sex: CR25 F vs CRV M | ||||
| Diet × Sex: CR25 F vs CRV M | 2.03 | [0.93, 3.11] | 100.00 | 0.00 |
| Diet × Sex: CRA M vs CRV F | ||||
| Diet × Sex: CRA M vs CRV F | -1.90 | [-3.14, -0.82] | 99.95 | 0.35 |
| Diet × Sex: CRA F vs CRV M | ||||
| Diet × Sex: CRA F vs CRV M | 1.45 | [0.40, 2.73] | 99.60 | 0.55 |
| Effect | Median | [95% HDI] | Direction Prob. | ROPE % |
|---|---|---|---|---|
| Session: Overall Change | ||||
| Session: Overall Change 1 - 2 | -0.74 | [-1.05, -0.43] | 100 | 0 |
| Effect | Median | [95% HDI] | Direction Prob. | ROPE % |
|---|---|---|---|---|
| Session: Control, M | ||||
| Session: Control, M 1 | 1.28 | [0.60, 1.95] | 100.00 | 0.00 |
| Session: Control, M 2 | 0.48 | [-0.34, 1.34] | 85.35 | 11.30 |
| Session: Control, M 1 - 2 | -0.80 | [-1.35, -0.17] | 99.75 | 1.05 |
| Session: CR25, M | ||||
| Session: CR25, M 1 | 1.33 | [0.51, 2.09] | 99.90 | 0.15 |
| Session: CR25, M 2 | 0.56 | [-0.51, 1.50] | 87.05 | 9.25 |
| Session: CR25, M 1 - 2 | -0.76 | [-1.49, -0.09] | 98.30 | 2.25 |
| Session: CRA, M | ||||
| Session: CRA, M 1 | 0.39 | [-0.50, 1.27] | 81.45 | 14.70 |
| Session: CRA, M 2 | -0.88 | [-2.16, 0.19] | 94.20 | 5.55 |
| Session: CRA, M 1 - 2 | -1.28 | [-2.07, -0.48] | 99.90 | 0.15 |
| Session: CRV, M | ||||
| Session: CRV, M 1 | 0.81 | [-0.03, 1.61] | 97.40 | 3.45 |
| Session: CRV, M 2 | 0.17 | [-0.88, 1.20] | 63.00 | 18.60 |
| Session: CRV, M 1 - 2 | -0.64 | [-1.41, 0.12] | 94.65 | 6.25 |
| Session: Control, F | ||||
| Session: Control, F 1 | 2.94 | [2.24, 3.66] | 100.00 | 0.00 |
| Session: Control, F 2 | 2.41 | [1.58, 3.31] | 100.00 | 0.00 |
| Session: Control, F 1 - 2 | -0.52 | [-1.12, 0.06] | 95.75 | 7.40 |
| Session: CR25, F | ||||
| Session: CR25, F 1 | 2.86 | [2.06, 3.66] | 100.00 | 0.00 |
| Session: CR25, F 2 | 2.17 | [1.29, 3.05] | 100.00 | 0.00 |
| Session: CR25, F 1 - 2 | -0.69 | [-1.33, -0.08] | 98.05 | 3.10 |
| Session: CRA, F | ||||
| Session: CRA, F 1 | 2.10 | [1.21, 3.07] | 100.00 | 0.00 |
| Session: CRA, F 2 | 1.80 | [0.86, 2.82] | 100.00 | 0.00 |
| Session: CRA, F 1 - 2 | -0.30 | [-0.94, 0.41] | 81.10 | 19.60 |
| Session: CRV, F | ||||
| Session: CRV, F 1 | 2.13 | [1.27, 2.96] | 100.00 | 0.00 |
| Session: CRV, F 2 | 1.16 | [0.18, 2.15] | 99.05 | 1.40 |
| Session: CRV, F 1 - 2 | -0.97 | [-1.65, -0.26] | 99.55 | 1.00 |
| Effect | Median | [95% HDI] | Direction Prob. | ROPE % |
|---|---|---|---|---|
| Session × Diet: Control, M - CR25, M | ||||
| Session × Diet: Control, M - CR25, M 1 | -0.05 | [-0.91, 0.89] | 54.40 | 21.20 |
| Session × Diet: Control, M - CR25, M 2 | -0.10 | [-1.18, 1.16] | 56.65 | 15.35 |
| Session × Diet: Control, M - CRA, M | ||||
| Session × Diet: Control, M - CRA, M 1 | 0.87 | [-0.06, 1.86] | 96.50 | 3.55 |
| Session × Diet: Control, M - CRA, M 2 | 1.33 | [0.01, 2.70] | 97.75 | 1.65 |
| Session × Diet: Control, M - CRV, M | ||||
| Session × Diet: Control, M - CRV, M 1 | 0.46 | [-0.41, 1.38] | 85.00 | 12.70 |
| Session × Diet: Control, M - CRV, M 2 | 0.29 | [-0.95, 1.54] | 69.70 | 13.95 |
| Session × Sex: Control, M - Control, F | ||||
| Session × Sex: Control, M - Control, F 1 | -1.65 | [-2.46, -0.81] | 100.00 | 0.00 |
| Session × Sex: Control, M - Control, F 2 | -1.94 | [-2.98, -0.82] | 100.00 | 0.00 |
| Session × Diet × Sex: Control, M - CR25, F | ||||
| Session × Diet × Sex: Control, M - CR25, F 1 | -1.58 | [-2.62, -0.56] | 99.95 | 0.20 |
| Session × Diet × Sex: Control, M - CR25, F 2 | -1.69 | [-2.80, -0.37] | 99.60 | 0.25 |
| Session × Diet × Sex: Control, M - CRA, F | ||||
| Session × Diet × Sex: Control, M - CRA, F 1 | -0.83 | [-1.94, 0.22] | 93.00 | 6.25 |
| Session × Diet × Sex: Control, M - CRA, F 2 | -1.35 | [-2.63, -0.09] | 98.00 | 1.70 |
| Session × Diet × Sex: Control, M - CRV, F | ||||
| Session × Diet × Sex: Control, M - CRV, F 1 | -0.86 | [-1.98, 0.18] | 94.25 | 5.20 |
| Session × Diet × Sex: Control, M - CRV, F 2 | -0.71 | [-2.03, 0.57] | 84.80 | 7.05 |
| Session × Diet: CR25, M - CRA, M | ||||
| Session × Diet: CR25, M - CRA, M 1 | 0.94 | [-0.09, 2.03] | 96.10 | 3.95 |
| Session × Diet: CR25, M - CRA, M 2 | 1.43 | [0.06, 2.87] | 97.95 | 1.85 |
| Session × Diet: CR25, M - CRV, M | ||||
| Session × Diet: CR25, M - CRV, M 1 | 0.52 | [-0.57, 1.48] | 83.65 | 9.60 |
| Session × Diet: CR25, M - CRV, M 2 | 0.39 | [-0.96, 1.63] | 72.25 | 11.45 |
| Session × Diet × Sex: CR25, M - Control, F | ||||
| Session × Diet × Sex: CR25, M - Control, F 1 | -1.60 | [-2.61, -0.57] | 99.85 | 0.25 |
| Session × Diet × Sex: CR25, M - Control, F 2 | -1.83 | [-3.19, -0.69] | 99.65 | 0.35 |
| Session × Sex: CR25, M - CR25, F | ||||
| Session × Sex: CR25, M - CR25, F 1 | -1.52 | [-2.61, -0.50] | 99.80 | 0.45 |
| Session × Sex: CR25, M - CR25, F 2 | -1.61 | [-2.83, -0.35] | 99.35 | 0.65 |
| Session × Diet × Sex: CR25, M - CRA, F | ||||
| Session × Diet × Sex: CR25, M - CRA, F 1 | -0.78 | [-1.94, 0.34] | 90.15 | 6.20 |
| Session × Diet × Sex: CR25, M - CRA, F 2 | -1.26 | [-2.43, 0.09] | 97.40 | 2.95 |
| Session × Diet × Sex: CR25, M - CRV, F | ||||
| Session × Diet × Sex: CR25, M - CRV, F 1 | -0.80 | [-1.90, 0.35] | 91.20 | 6.25 |
| Session × Diet × Sex: CR25, M - CRV, F 2 | -0.63 | [-1.86, 0.75] | 82.15 | 8.80 |
| Session × Diet: CRA, M - CRV, M | ||||
| Session × Diet: CRA, M - CRV, M 1 | -0.41 | [-1.53, 0.66] | 77.25 | 12.85 |
| Session × Diet: CRA, M - CRV, M 2 | -1.04 | [-2.41, 0.42] | 92.00 | 4.10 |
| Session × Diet × Sex: CRA, M - Control, F | ||||
| Session × Diet × Sex: CRA, M - Control, F 1 | -2.52 | [-3.67, -1.45] | 100.00 | 0.00 |
| Session × Diet × Sex: CRA, M - Control, F 2 | -3.28 | [-4.71, -1.77] | 100.00 | 0.00 |
| Session × Diet × Sex: CRA, M - CR25, F | ||||
| Session × Diet × Sex: CRA, M - CR25, F 1 | -2.44 | [-3.65, -1.30] | 100.00 | 0.00 |
| Session × Diet × Sex: CRA, M - CR25, F 2 | -3.04 | [-4.47, -1.62] | 100.00 | 0.00 |
| Session × Sex: CRA, M - CRA, F | ||||
| Session × Sex: CRA, M - CRA, F 1 | -1.71 | [-2.77, -0.66] | 99.90 | 0.25 |
| Session × Sex: CRA, M - CRA, F 2 | -2.68 | [-4.19, -1.46] | 100.00 | 0.00 |
| Session × Diet × Sex: CRA, M - CRV, F | ||||
| Session × Diet × Sex: CRA, M - CRV, F 1 | -1.74 | [-2.80, -0.57] | 99.75 | 0.15 |
| Session × Diet × Sex: CRA, M - CRV, F 2 | -2.05 | [-3.42, -0.57] | 99.70 | 0.20 |
| Session × Diet × Sex: CRV, M - Control, F | ||||
| Session × Diet × Sex: CRV, M - Control, F 1 | -2.12 | [-3.16, -1.05] | 100.00 | 0.00 |
| Session × Diet × Sex: CRV, M - Control, F 2 | -2.24 | [-3.49, -0.84] | 100.00 | 0.05 |
| Session × Diet × Sex: CRV, M - CR25, F | ||||
| Session × Diet × Sex: CRV, M - CR25, F 1 | -2.04 | [-3.06, -0.77] | 100.00 | 0.05 |
| Session × Diet × Sex: CRV, M - CR25, F 2 | -1.98 | [-3.29, -0.66] | 99.95 | 0.10 |
| Session × Diet × Sex: CRV, M - CRA, F | ||||
| Session × Diet × Sex: CRV, M - CRA, F 1 | -1.30 | [-2.34, 0.01] | 97.95 | 1.75 |
| Session × Diet × Sex: CRV, M - CRA, F 2 | -1.62 | [-2.96, -0.35] | 99.35 | 0.45 |
| Session × Sex: CRV, M - CRV, F | ||||
| Session × Sex: CRV, M - CRV, F 1 | -1.32 | [-2.29, -0.22] | 99.50 | 0.85 |
| Session × Sex: CRV, M - CRV, F 2 | -1.00 | [-2.34, 0.35] | 92.85 | 4.45 |
| Session × Diet: Control, F - CR25, F | ||||
| Session × Diet: Control, F - CR25, F 1 | 0.08 | [-0.88, 1.07] | 56.60 | 19.25 |
| Session × Diet: Control, F - CR25, F 2 | 0.23 | [-1.01, 1.43] | 66.25 | 14.65 |
| Session × Diet: Control, F - CRA, F | ||||
| Session × Diet: Control, F - CRA, F 1 | 0.83 | [-0.28, 1.82] | 94.30 | 5.35 |
| Session × Diet: Control, F - CRA, F 2 | 0.60 | [-0.62, 1.84] | 81.50 | 9.10 |
| Session × Diet: Control, F - CRV, F | ||||
| Session × Diet: Control, F - CRV, F 1 | 0.79 | [-0.15, 1.86] | 94.45 | 5.65 |
| Session × Diet: Control, F - CRV, F 2 | 1.23 | [0.00, 2.48] | 98.00 | 2.05 |
| Session × Diet: CR25, F - CRA, F | ||||
| Session × Diet: CR25, F - CRA, F 1 | 0.74 | [-0.34, 2.00] | 89.40 | 6.70 |
| Session × Diet: CR25, F - CRA, F 2 | 0.35 | [-0.86, 1.71] | 70.75 | 14.50 |
| Session × Diet: CR25, F - CRV, F | ||||
| Session × Diet: CR25, F - CRV, F 1 | 0.73 | [-0.32, 1.89] | 89.70 | 8.55 |
| Session × Diet: CR25, F - CRV, F 2 | 1.01 | [-0.15, 2.31] | 94.30 | 4.70 |
| Session × Diet: CRA, F - CRV, F | ||||
| Session × Diet: CRA, F - CRV, F 1 | -0.03 | [-1.12, 1.19] | 52.05 | 16.55 |
| Session × Diet: CRA, F - CRV, F 2 | 0.63 | [-0.55, 2.08] | 83.35 | 8.15 |
| Effect | Median | [95% HDI] | Direction Prob. | ROPE % |
|---|---|---|---|---|
| Diet: Control vs CR25 | Session = 1 | averaged over Sex | ||||
| Diet: Control vs CR25 | Session = 1 | averaged over Sex 1 | 0.02 | [-0.70, 0.76] | 52.15 | 26.30 |
| Diet: Control vs CRA | Session = 1 | averaged over Sex | ||||
| Diet: Control vs CRA | Session = 1 | averaged over Sex 1 | 0.85 | [-0.01, 1.65] | 98.10 | 3.15 |
| Diet: Control vs CRV | Session = 1 | averaged over Sex | ||||
| Diet: Control vs CRV | Session = 1 | averaged over Sex 1 | 0.63 | [-0.10, 1.43] | 94.95 | 7.05 |
| Diet: CR25 vs CRA | Session = 1 | averaged over Sex | ||||
| Diet: CR25 vs CRA | Session = 1 | averaged over Sex 1 | 0.83 | [-0.04, 1.69] | 97.10 | 3.45 |
| Diet: CR25 vs CRV | Session = 1 | averaged over Sex | ||||
| Diet: CR25 vs CRV | Session = 1 | averaged over Sex 1 | 0.63 | [-0.22, 1.40] | 93.05 | 7.55 |
| Diet: CRA vs CRV | Session = 1 | averaged over Sex | ||||
| Diet: CRA vs CRV | Session = 1 | averaged over Sex 1 | -0.21 | [-1.10, 0.59] | 68.80 | 19.35 |
| Diet: Control vs CR25 | Session = 2 | averaged over Sex | ||||
| Diet: Control vs CR25 | Session = 2 | averaged over Sex 2 | 0.08 | [-0.78, 0.95] | 57.35 | 20.90 |
| Diet: Control vs CRA | Session = 2 | averaged over Sex | ||||
| Diet: Control vs CRA | Session = 2 | averaged over Sex 2 | 0.98 | [-0.07, 1.93] | 97.25 | 2.95 |
| Diet: Control vs CRV | Session = 2 | averaged over Sex | ||||
| Diet: Control vs CRV | Session = 2 | averaged over Sex 2 | 0.77 | [-0.15, 1.70] | 94.65 | 5.70 |
| Diet: CR25 vs CRA | Session = 2 | averaged over Sex | ||||
| Diet: CR25 vs CRA | Session = 2 | averaged over Sex 2 | 0.90 | [-0.03, 1.92] | 96.25 | 3.95 |
| Diet: CR25 vs CRV | Session = 2 | averaged over Sex | ||||
| Diet: CR25 vs CRV | Session = 2 | averaged over Sex 2 | 0.70 | [-0.23, 1.64] | 93.05 | 7.40 |
| Diet: CRA vs CRV | Session = 2 | averaged over Sex | ||||
| Diet: CRA vs CRV | Session = 2 | averaged over Sex 2 | -0.20 | [-1.20, 0.73] | 67.05 | 17.50 |
| Sex: M vs F | Session = 1 | averaged over Diet | ||||
| Sex: M vs F | Session = 1 | averaged over Diet 1 | -1.54 | [-2.12, -0.92] | 100.00 | 0.00 |
| Sex: M vs F | Session = 2 | averaged over Diet | ||||
| Sex: M vs F | Session = 2 | averaged over Diet 2 | -1.80 | [-2.44, -1.08] | 100.00 | 0.00 |